6JNI
Crystal structure of the transcriptional regulator CadR from P. putida in complex with Zinc(II) and DNA
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0003677 | molecular_function | DNA binding |
| A | 0003700 | molecular_function | DNA-binding transcription factor activity |
| A | 0006355 | biological_process | regulation of DNA-templated transcription |
| A | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0003677 | molecular_function | DNA binding |
| B | 0003700 | molecular_function | DNA-binding transcription factor activity |
| B | 0006355 | biological_process | regulation of DNA-templated transcription |
| B | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| B | 0046872 | molecular_function | metal ion binding |
| C | 0003677 | molecular_function | DNA binding |
| C | 0003700 | molecular_function | DNA-binding transcription factor activity |
| C | 0006355 | biological_process | regulation of DNA-templated transcription |
| C | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| C | 0046872 | molecular_function | metal ion binding |
| D | 0003677 | molecular_function | DNA binding |
| D | 0003700 | molecular_function | DNA-binding transcription factor activity |
| D | 0006355 | biological_process | regulation of DNA-templated transcription |
| D | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| D | 0046872 | molecular_function | metal ion binding |
| E | 0003677 | molecular_function | DNA binding |
| E | 0003700 | molecular_function | DNA-binding transcription factor activity |
| E | 0006355 | biological_process | regulation of DNA-templated transcription |
| E | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| E | 0046872 | molecular_function | metal ion binding |
| F | 0003677 | molecular_function | DNA binding |
| F | 0003700 | molecular_function | DNA-binding transcription factor activity |
| F | 0006355 | biological_process | regulation of DNA-templated transcription |
| F | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| F | 0046872 | molecular_function | metal ion binding |
| G | 0003677 | molecular_function | DNA binding |
| G | 0003700 | molecular_function | DNA-binding transcription factor activity |
| G | 0006355 | biological_process | regulation of DNA-templated transcription |
| G | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| G | 0046872 | molecular_function | metal ion binding |
| H | 0003677 | molecular_function | DNA binding |
| H | 0003700 | molecular_function | DNA-binding transcription factor activity |
| H | 0006355 | biological_process | regulation of DNA-templated transcription |
| H | 0045893 | biological_process | positive regulation of DNA-templated transcription |
| H | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | binding site for residue ZN A 1001 |
| Chain | Residue |
| A | CYS77 |
| B | CYS112 |
| B | CYS119 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 1002 |
| Chain | Residue |
| A | GLU62 |
| A | HIS87 |
| A | HIS90 |
| A | HIS140 |
| site_id | AC3 |
| Number of Residues | 3 |
| Details | binding site for residue ZN A 1003 |
| Chain | Residue |
| B | CYS77 |
| A | CYS112 |
| A | CYS119 |
| site_id | AC4 |
| Number of Residues | 4 |
| Details | binding site for residue ZN B 201 |
| Chain | Residue |
| A | HIS145 |
| B | GLU62 |
| B | HIS87 |
| B | HIS90 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue ZN C 201 |
| Chain | Residue |
| C | GLU62 |
| C | HIS87 |
| C | HIS90 |
| D | HIS145 |
| site_id | AC6 |
| Number of Residues | 3 |
| Details | binding site for residue ZN D 201 |
| Chain | Residue |
| C | CYS77 |
| D | CYS112 |
| D | CYS119 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | binding site for residue ZN D 202 |
| Chain | Residue |
| C | CYS112 |
| C | CYS119 |
| D | CYS77 |
| site_id | AC8 |
| Number of Residues | 4 |
| Details | binding site for residue ZN D 203 |
| Chain | Residue |
| D | GLU62 |
| D | HIS87 |
| D | HIS90 |
| D | HIS140 |
| site_id | AC9 |
| Number of Residues | 4 |
| Details | binding site for residue ZN E 201 |
| Chain | Residue |
| E | GLU62 |
| E | HIS87 |
| E | HIS90 |
| E | HIS140 |
| site_id | AD1 |
| Number of Residues | 3 |
| Details | binding site for residue ZN E 202 |
| Chain | Residue |
| E | CYS77 |
| F | CYS112 |
| F | CYS119 |
| site_id | AD2 |
| Number of Residues | 3 |
| Details | binding site for residue ZN E 203 |
| Chain | Residue |
| E | CYS112 |
| E | CYS119 |
| F | CYS77 |
| site_id | AD3 |
| Number of Residues | 4 |
| Details | binding site for residue ZN F 201 |
| Chain | Residue |
| E | HIS145 |
| F | GLU62 |
| F | HIS87 |
| F | HIS90 |
| site_id | AD4 |
| Number of Residues | 4 |
| Details | binding site for residue ZN G 201 |
| Chain | Residue |
| G | GLU62 |
| G | HIS87 |
| G | HIS90 |
| H | HIS145 |
| site_id | AD5 |
| Number of Residues | 3 |
| Details | binding site for residue ZN G 202 |
| Chain | Residue |
| G | CYS112 |
| G | CYS119 |
| H | CYS77 |
| site_id | AD6 |
| Number of Residues | 4 |
| Details | binding site for residue ZN H 201 |
| Chain | Residue |
| H | GLU62 |
| H | HIS87 |
| H | HIS90 |
| H | HIS140 |
| site_id | AD7 |
| Number of Residues | 4 |
| Details | binding site for residue ZN H 202 |
| Chain | Residue |
| G | CYS77 |
| G | ASN81 |
| H | CYS112 |
| H | CYS119 |
Functional Information from PROSITE/UniProt
| site_id | PS00552 |
| Number of Residues | 23 |
| Details | HTH_MERR_1 MerR-type HTH domain signature. GeLAkaTDCAvetIRyYEre.QLL |
| Chain | Residue | Details |
| A | GLY4-LEU26 |
