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6JIL

Crystal structure of D-cycloserine synthetase DcsG

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0005524molecular_functionATP binding
A0016874molecular_functionligase activity
A0016882molecular_functioncyclo-ligase activity
A0017000biological_processantibiotic biosynthetic process
A0046872molecular_functionmetal ion binding
B0000166molecular_functionnucleotide binding
B0005524molecular_functionATP binding
B0016874molecular_functionligase activity
B0016882molecular_functioncyclo-ligase activity
B0017000biological_processantibiotic biosynthetic process
B0046872molecular_functionmetal ion binding
C0000166molecular_functionnucleotide binding
C0005524molecular_functionATP binding
C0016874molecular_functionligase activity
C0016882molecular_functioncyclo-ligase activity
C0017000biological_processantibiotic biosynthetic process
C0046872molecular_functionmetal ion binding
D0000166molecular_functionnucleotide binding
D0005524molecular_functionATP binding
D0016874molecular_functionligase activity
D0016882molecular_functioncyclo-ligase activity
D0017000biological_processantibiotic biosynthetic process
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue TLA A 401
ChainResidue
ATRP45
APHE69
AARG72
AVAL73
AHOH553

site_idAC2
Number of Residues13
Detailsbinding site for residue TLA A 402
ChainResidue
AARG254
AGLU269
AGLU271
ASER276
AADP403
AMG404
AMG405
AHOH528
AHOH584
ACYS142
ATYR143
ALYS202
AARG220

site_idAC3
Number of Residues23
Detailsbinding site for residue ADP A 403
ChainResidue
ALYS92
ALYS137
ACYS142
ATYR143
ASER144
AGLN175
APRO176
ATYR177
AVAL178
AGLU186
AMSE205
ALEU206
ALEU268
AGLU269
ATLA402
AMG404
AMG405
AHOH516
AHOH526
AHOH527
AHOH535
AHOH554
AHOH592

site_idAC4
Number of Residues6
Detailsbinding site for residue MG A 404
ChainResidue
ALYS202
AGLU269
ATLA402
AADP403
AHOH501
AHOH527

site_idAC5
Number of Residues5
Detailsbinding site for residue MG A 405
ChainResidue
AGLU269
AGLU271
ATLA402
AADP403
AHOH526

site_idAC6
Number of Residues8
Detailsbinding site for residue TLA B 401
ChainResidue
BGLY114
BSER115
BALA117
BALA163
BLEU166
BALA167
BHOH505
BHOH515

site_idAC7
Number of Residues4
Detailsbinding site for residue TLA B 402
ChainResidue
BTRP45
BPHE69
BARG72
BVAL73

site_idAC8
Number of Residues14
Detailsbinding site for residue TLA B 403
ChainResidue
BCYS142
BTYR143
BLYS202
BARG220
BARG254
BGLU269
BGLU271
BSER276
BADP404
BMG405
BMG406
BHOH512
BHOH538
BHOH570

site_idAC9
Number of Residues25
Detailsbinding site for residue ADP B 404
ChainResidue
BHOH521
BHOH529
BHOH580
BHOH583
BLYS92
BVAL135
BLYS137
BGLY141
BCYS142
BTYR143
BSER144
BGLN175
BPRO176
BTYR177
BVAL178
BVAL181
BGLU186
BMSE205
BLEU206
BLEU268
BGLU269
BTLA403
BMG405
BMG406
BHOH512

site_idAD1
Number of Residues7
Detailsbinding site for residue MG B 405
ChainResidue
BLYS202
BASP256
BGLU269
BTLA403
BADP404
BHOH504
BHOH512

site_idAD2
Number of Residues5
Detailsbinding site for residue MG B 406
ChainResidue
BGLU269
BGLU271
BTLA403
BADP404
BHOH521

site_idAD3
Number of Residues7
Detailsbinding site for residue TLA C 401
ChainResidue
CGLY114
CSER115
CALA117
CLEU166
DGLU227
DASP228
DHOH558

site_idAD4
Number of Residues6
Detailsbinding site for residue TLA C 402
ChainResidue
CTRP45
CPHE69
CARG72
CVAL73
CVAL76
CHOH537

site_idAD5
Number of Residues12
Detailsbinding site for residue TLA C 403
ChainResidue
CCYS142
CTYR143
CLYS202
CARG220
CARG254
CGLU269
CGLU271
CSER276
CADP404
CMG405
CMG406
CHOH529

site_idAD6
Number of Residues23
Detailsbinding site for residue ADP C 404
ChainResidue
CLYS92
CLYS137
CCYS142
CTYR143
CSER144
CGLN175
CPRO176
CTYR177
CVAL178
CVAL181
CGLU186
CMSE205
CLEU206
CLEU268
CGLU269
CTLA403
CMG405
CMG406
CHOH510
CHOH536
CHOH540
CHOH548
CHOH562

site_idAD7
Number of Residues6
Detailsbinding site for residue MG C 405
ChainResidue
CLYS202
CGLU269
CTLA403
CADP404
CHOH501
CHOH570

site_idAD8
Number of Residues5
Detailsbinding site for residue MG C 406
ChainResidue
CGLU269
CGLU271
CTLA403
CADP404
CHOH562

site_idAD9
Number of Residues3
Detailsbinding site for residue TLA D 401
ChainResidue
DTRP45
DPHE69
DARG72

site_idAE1
Number of Residues14
Detailsbinding site for residue TLA D 402
ChainResidue
DTRP57
DCYS142
DTYR143
DLYS202
DPRO215
DARG254
DGLU269
DGLU271
DSER276
DADP403
DMG404
DMG405
DMG406
DHOH555

site_idAE2
Number of Residues24
Detailsbinding site for residue ADP D 403
ChainResidue
DLYS92
DVAL135
DLYS137
DCYS142
DTYR143
DSER144
DGLN175
DPRO176
DTYR177
DVAL178
DVAL181
DGLU186
DMSE205
DLEU206
DLEU268
DGLU269
DTLA402
DMG404
DMG405
DHOH502
DHOH512
DHOH538
DHOH542
DHOH543

site_idAE3
Number of Residues7
Detailsbinding site for residue MG D 404
ChainResidue
DLYS202
DASP256
DGLU269
DTLA402
DADP403
DHOH502
DHOH505

site_idAE4
Number of Residues6
Detailsbinding site for residue MG D 405
ChainResidue
DGLY141
DCYS142
DGLU269
DGLU271
DTLA402
DADP403

site_idAE5
Number of Residues4
Detailsbinding site for residue MG D 406
ChainResidue
DTRP57
DGLU271
DGLU274
DTLA402

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsActive site: {"evidences":[{"source":"PubMed","id":"31793174","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues28
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"31793174","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6JIL","evidenceCode":"ECO:0000312"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

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