6JI2

Crystal structure of archaeal ribosomal protein aP1, aPelota, and GTP-bound aEF1A complex

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0000287	molecular_function	magnesium ion binding
A	0003746	molecular_function	translation elongation factor activity
A	0003924	molecular_function	GTPase activity
A	0005525	molecular_function	GTP binding
A	0005737	cellular_component	cytoplasm
A	0006412	biological_process	translation
A	0006414	biological_process	translational elongation
A	0016787	molecular_function	hydrolase activity
A	0046872	molecular_function	metal ion binding
B	0004518	molecular_function	nuclease activity
B	0004519	molecular_function	endonuclease activity
B	0005737	cellular_component	cytoplasm
B	0016787	molecular_function	hydrolase activity
B	0032790	biological_process	ribosome disassembly
B	0046872	molecular_function	metal ion binding
B	0070481	biological_process	nuclear-transcribed mRNA catabolic process, non-stop decay
B	0070651	biological_process	nonfunctional rRNA decay
B	0070966	biological_process	nuclear-transcribed mRNA catabolic process, no-go decay
B	0071025	biological_process	RNA surveillance
E	0000166	molecular_function	nucleotide binding
E	0000287	molecular_function	magnesium ion binding
E	0003746	molecular_function	translation elongation factor activity
E	0003924	molecular_function	GTPase activity
E	0005525	molecular_function	GTP binding
E	0005737	cellular_component	cytoplasm
E	0006412	biological_process	translation
E	0006414	biological_process	translational elongation
E	0016787	molecular_function	hydrolase activity
E	0046872	molecular_function	metal ion binding
F	0004518	molecular_function	nuclease activity
F	0004519	molecular_function	endonuclease activity
F	0005737	cellular_component	cytoplasm
F	0016787	molecular_function	hydrolase activity
F	0032790	biological_process	ribosome disassembly
F	0046872	molecular_function	metal ion binding
F	0070481	biological_process	nuclear-transcribed mRNA catabolic process, non-stop decay
F	0070651	biological_process	nonfunctional rRNA decay
F	0070966	biological_process	nuclear-transcribed mRNA catabolic process, no-go decay
F	0071025	biological_process	RNA surveillance

Functional Information from PDB Data

site_id	AC1
Number of Residues	21
Details	binding site for residue GTP A 501

Chain	Residue
A	VAL15
A	ILE70
A	THR71
A	GLY93
A	ASN152
A	LYS153
A	ASP155
A	SER193
A	ALA194
A	TRP195
A	MG502
A	ASP16
A	NA503
A	HOH601
A	HIS17
A	GLY18
A	LYS19
A	SER20
A	THR21
A	SER52
A	PHE53

---

site_id	AC2
Number of Residues	5
Details	binding site for residue MG A 502

Chain	Residue
A	SER20
A	THR71
A	ASP90
A	GTP501
A	HOH601

---

site_id	AC3
Number of Residues	4
Details	binding site for residue NA A 503

Chain	Residue
A	ASP16
A	GLY69
A	GTP501
A	HOH601

---

site_id	AC4
Number of Residues	22
Details	binding site for residue GTP E 501

Chain	Residue
E	HIS14
E	VAL15
E	ASP16
E	HIS17
E	GLY18
E	LYS19
E	SER20
E	THR21
E	SER52
E	PHE53
E	ILE70
E	THR71
E	GLY93
E	ASN152
E	LYS153
E	ASP155
E	SER193
E	ALA194
E	TRP195
E	MG502
E	NA503
E	HOH602

---

site_id	AC5
Number of Residues	6
Details	binding site for residue MG E 502

Chain	Residue
E	SER20
E	ASP60
E	THR71
E	GTP501
E	NA503
E	HOH602

---

site_id	AC6
Number of Residues	4
Details	binding site for residue NA E 503

Chain	Residue
E	ASP16
E	GLY69
E	GTP501
E	MG502

---

Functional Information from PROSITE/UniProt

site_id	PS00301
Number of Residues	16
Details	G_TR_1 Translational (tr)-type guanine nucleotide-binding (G) domain signature. DKmkeEReRGITIdlT

Chain	Residue	Details
A	ASP60-THR75

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	450
Details	Domain: {"description":"tr-type G"}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	14
Details	Region: {"description":"G1","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	8
Details	Region: {"description":"G2","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	6
Details	Region: {"description":"G3","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	6
Details	Region: {"description":"G4","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI6
Number of Residues	4
Details	Region: {"description":"G5","evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI7
Number of Residues	30
Details	Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00118","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---