Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6JBN

Crystal structure of Sphingomonas sp. A1 peroxidase EfeB responsible for import of iron

Functional Information from GO Data
ChainGOidnamespacecontents
A0004601molecular_functionperoxidase activity
A0020037molecular_functionheme binding
A0033212biological_processiron import into cell
B0004601molecular_functionperoxidase activity
B0020037molecular_functionheme binding
B0033212biological_processiron import into cell
Functional Information from PDB Data
site_idAC1
Number of Residues26
Detailsbinding site for residue HEM A 501
ChainResidue
AASN242
AMET307
AHIS343
AILE344
AALA347
AASN348
AARG350
AILE359
AARG361
ALEU380
APHE382
ALEU244
AVAL396
AGLN397
ALEU400
AOXY502
AHOH606
AHOH610
AHOH658
APHE246
AARG247
AGLY249
ASER250
AALA251
AILE288
AASN290

site_idAC2
Number of Residues3
Detailsbinding site for residue OXY A 502
ChainResidue
AASP248
AARG361
AHEM501

site_idAC3
Number of Residues7
Detailsbinding site for residue PEG A 503
ChainResidue
AGLY224
ATHR225
AASN365
ATYR366
ASER367
AHOH703
BGLU223

site_idAC4
Number of Residues2
Detailsbinding site for residue PEG A 504
ChainResidue
AARG102
AHOH704

site_idAC5
Number of Residues7
Detailsbinding site for residue PEG A 505
ChainResidue
ALYS221
AGLN222
AGLU223
AASN368
BASN368
BGLY369
BPGE516

site_idAC6
Number of Residues6
Detailsbinding site for residue EDO A 506
ChainResidue
AASP56
AALA57
APRO58
AHOH604
BPRO80
BARG81

site_idAC7
Number of Residues3
Detailsbinding site for residue EDO A 507
ChainResidue
AGLU99
AARG102
AEDO508

site_idAC8
Number of Residues3
Detailsbinding site for residue EDO A 508
ChainResidue
AASN357
AARG399
AEDO507

site_idAC9
Number of Residues2
Detailsbinding site for residue EDO A 509
ChainResidue
AARG305
AARG337

site_idAD1
Number of Residues3
Detailsbinding site for residue EDO A 510
ChainResidue
APRO176
AEDO516
BTHR235

site_idAD2
Number of Residues2
Detailsbinding site for residue EDO A 511
ChainResidue
AASP181
BASP61

site_idAD3
Number of Residues2
Detailsbinding site for residue EDO A 512
ChainResidue
AARG350
AHOH681

site_idAD4
Number of Residues3
Detailsbinding site for residue EDO A 513
ChainResidue
AGLU302
AASP341
AHOH700

site_idAD5
Number of Residues3
Detailsbinding site for residue EDO A 515
ChainResidue
APRO274
AALA275
ATRP276

site_idAD6
Number of Residues5
Detailsbinding site for residue EDO A 516
ChainResidue
AGLY51
AGLN53
AASP56
AEDO510
BSER237

site_idAD7
Number of Residues1
Detailsbinding site for residue EDO A 518
ChainResidue
AHOH672

site_idAD8
Number of Residues2
Detailsbinding site for residue EDO A 519
ChainResidue
AGLU101
AASP436

site_idAD9
Number of Residues23
Detailsbinding site for residue HEM B 501
ChainResidue
BOXY502
BHOH610
BHOH632
BHOH650
BASN242
BPHE246
BARG247
BGLY249
BSER250
BALA251
BILE288
BASN290
BMET307
BHIS343
BILE344
BASN348
BARG350
BARG361
BPHE382
BPHE393
BVAL396
BGLN397
BILE409

site_idAE1
Number of Residues3
Detailsbinding site for residue OXY B 502
ChainResidue
BASP248
BARG361
BHEM501

site_idAE2
Number of Residues2
Detailsbinding site for residue PEG B 503
ChainResidue
AASN62
BASN62

site_idAE3
Number of Residues3
Detailsbinding site for residue PEG B 504
ChainResidue
BARG305
BTHR336
BARG337

site_idAE4
Number of Residues3
Detailsbinding site for residue EDO B 505
ChainResidue
BGLU101
BLEU435
BASP436

site_idAE5
Number of Residues2
Detailsbinding site for residue EDO B 506
ChainResidue
BLYS210
BASN211

site_idAE6
Number of Residues6
Detailsbinding site for residue EDO B 508
ChainResidue
AVAL229
AGLU238
AARG247
BLEU135
BGLY136
BPRO137

site_idAE7
Number of Residues10
Detailsbinding site for residue EDO B 509
ChainResidue
BGLY151
BASP152
BSER153
BHIS186
BGLY187
BTYR416
BPHE417
BHOH604
BHOH611
BHOH629

site_idAE8
Number of Residues4
Detailsbinding site for residue EDO B 510
ChainResidue
AGLY402
AGLU403
APRO404
BGLY234

site_idAE9
Number of Residues4
Detailsbinding site for residue EDO B 511
ChainResidue
BPRO274
BALA275
BTRP276
BALA437

site_idAF1
Number of Residues2
Detailsbinding site for residue EDO B 512
ChainResidue
BARG105
BTHR106

site_idAF2
Number of Residues1
Detailsbinding site for residue EDO B 513
ChainResidue
BGLU109

site_idAF3
Number of Residues1
Detailsbinding site for residue EDO B 514
ChainResidue
BPRO213

site_idAF4
Number of Residues5
Detailsbinding site for residue PGE B 515
ChainResidue
BGLU109
BARG110
BGLN120
BTHR130
BASN211

site_idAF5
Number of Residues6
Detailsbinding site for residue PGE B 516
ChainResidue
ATRP220
ALYS221
APEG505
BVAL370
BTHR371
BLYS372

site_idAF6
Number of Residues8
Detailsbinding site for residue PGE B 517
ChainResidue
AASN368
BLYS221
BGLN222
BGLU223
BASN368
BGLU377
BILE412
BHOH622

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon