6J7M
Complex structure of the Pseudomonas aeruginosa rhamnosyltransferase EarP with the acceptor elongation factor EF-P
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0016740 | molecular_function | transferase activity |
| A | 0016757 | molecular_function | glycosyltransferase activity |
| A | 0106361 | molecular_function | protein-arginine rhamnosyltransferase activity |
| C | 0016740 | molecular_function | transferase activity |
| C | 0016757 | molecular_function | glycosyltransferase activity |
| C | 0106361 | molecular_function | protein-arginine rhamnosyltransferase activity |
| M | 0003746 | molecular_function | translation elongation factor activity |
| M | 0005737 | cellular_component | cytoplasm |
| M | 0005829 | cellular_component | cytosol |
| M | 0006412 | biological_process | translation |
| M | 0006414 | biological_process | translational elongation |
| M | 0043043 | biological_process | peptide biosynthetic process |
| N | 0003746 | molecular_function | translation elongation factor activity |
| N | 0005737 | cellular_component | cytoplasm |
| N | 0005829 | cellular_component | cytosol |
| N | 0006412 | biological_process | translation |
| N | 0006414 | biological_process | translational elongation |
| N | 0043043 | biological_process | peptide biosynthetic process |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 16 |
| Details | binding site for residue TYD A 401 |
| Chain | Residue |
| A | ASN13 |
| A | TYR257 |
| A | ARG270 |
| A | GLY271 |
| A | GLU272 |
| A | ASP273 |
| A | SER274 |
| A | GOL402 |
| A | TYR14 |
| A | GLY15 |
| A | ILE48 |
| A | PHE190 |
| A | TYR192 |
| A | PHE251 |
| A | MET252 |
| A | GLN254 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | binding site for residue GOL A 402 |
| Chain | Residue |
| A | ASN13 |
| A | TYR192 |
| A | GLU272 |
| A | TYR290 |
| A | TYD401 |
| M | ARG32 |
| M | HOH212 |
| site_id | AC3 |
| Number of Residues | 16 |
| Details | binding site for residue TYD C 401 |
| Chain | Residue |
| C | ASN13 |
| C | TYR14 |
| C | GLY15 |
| C | ILE48 |
| C | PHE190 |
| C | TYR192 |
| C | PHE251 |
| C | MET252 |
| C | GLN254 |
| C | TYR257 |
| C | ARG270 |
| C | GLY271 |
| C | GLU272 |
| C | ASP273 |
| C | SER274 |
| C | GOL402 |
| site_id | AC4 |
| Number of Residues | 6 |
| Details | binding site for residue GOL C 402 |
| Chain | Residue |
| C | GLY15 |
| C | GLU272 |
| C | TYR290 |
| C | TYD401 |
| C | HOH603 |
| N | ARG32 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"31010899","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Active site: {"evidences":[{"source":"PubMed","id":"31010899","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 20 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31010899","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6J7K","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 2 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"31010899","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6J7L","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"6J7M","evidenceCode":"ECO:0007744"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 2 |
| Details | Glycosylation: {"description":"N-alpha-linked (Rha) arginine","evidences":[{"source":"PubMed","id":"26060278","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28451135","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28451332","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"31010899","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
