Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6IPF

Post-catalytic Complex of Human DNA Polymerase Mu with Templating Cytosine and Mn-8oxodGMP

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0003887molecular_functionDNA-directed DNA polymerase activity
A0005634cellular_componentnucleus
A0006281biological_processDNA repair
A0016779molecular_functionnucleotidyltransferase activity
A0034061molecular_functionDNA polymerase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MN A 501
ChainResidue
AASP330
AASP332
AMN502
APPV503
AHOH606
P8OG5

site_idAC2
Number of Residues7
Detailsbinding site for residue MN A 502
ChainResidue
AMN501
PDA4
P8OG5
PHOH208
AASP330
AASP332
AASP418

site_idAC3
Number of Residues17
Detailsbinding site for residue PPV A 503
ChainResidue
AGLY319
AGLY320
AARG323
ALYS325
AHIS329
AASP330
AASP332
AMN501
AHOH602
AHOH603
AHOH605
AHOH606
AHOH633
AHOH711
AHOH764
P8OG5
PMN101

site_idAC4
Number of Residues6
Detailsbinding site for residue NA A 504
ChainResidue
ATHR241
AILE243
AVAL246
AHOH783
PDT3
PHOH216

site_idAC5
Number of Residues5
Detailsbinding site for residue NA A 505
ChainResidue
AGLU386
AHIS459
AHOH770
AHOH800
THOH101

site_idAC6
Number of Residues2
Detailsbinding site for residue CL A 506
ChainResidue
AGLU218
AHIS219

site_idAC7
Number of Residues4
Detailsbinding site for residue EPE A 507
ChainResidue
ALYS325
ALEU326
AGLN327
AHOH642

site_idAC8
Number of Residues4
Detailsbinding site for residue EDO A 508
ChainResidue
APRO190
ASER191
APRO192
AGLN198

site_idAC9
Number of Residues3
Detailsbinding site for residue EDO A 509
ChainResidue
ALYS438
AARG442
AHOH729

site_idAD1
Number of Residues8
Detailsbinding site for residue EDO A 510
ChainResidue
AARG387
AARG445
AASN457
ASER458
AHIS459
AEDO511
TDT6
TDA7

site_idAD2
Number of Residues8
Detailsbinding site for residue EDO A 511
ChainResidue
AARG387
AGLY433
ATRP434
AARG445
ASER458
AEDO510
AHOH637
PDA4

site_idAD3
Number of Residues6
Detailsbinding site for residue MN P 101
ChainResidue
APPV503
AHOH602
AHOH795
P8OG5
PMN102
PHOH204

site_idAD4
Number of Residues6
Detailsbinding site for residue MN P 102
ChainResidue
AHOH602
P8OG5
PMN101
PHOH204
PHOH214
PHOH219

site_idAD5
Number of Residues6
Detailsbinding site for residue EPE D 101
ChainResidue
AARG175
AHOH612
DDG1
TDC1
TDG2
TDG3

Functional Information from PROSITE/UniProt
site_idPS00522
Number of Residues20
DetailsDNA_POLYMERASE_X DNA polymerase family X signature. GGFrRGklqGhDVDFLIthP
ChainResidueDetails
AGLY319-PRO338

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000250
ChainResidueDetails
AASP330
AASP332
AASP418

site_idSWS_FT_FI2
Number of Residues1
DetailsSITE: Responsible for the low discrimination between dNTP and rNTP
ChainResidueDetails
AGLY433

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon