6IOY
Crystal structure of Porphyromonas gingivalis acetate kinase
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0000287 | molecular_function | magnesium ion binding |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0006082 | biological_process | obsolete organic acid metabolic process |
| A | 0006083 | biological_process | acetate metabolic process |
| A | 0006085 | biological_process | acetyl-CoA biosynthetic process |
| A | 0008776 | molecular_function | acetate kinase activity |
| A | 0016301 | molecular_function | kinase activity |
| A | 0016310 | biological_process | phosphorylation |
| A | 0016774 | molecular_function | phosphotransferase activity, carboxyl group as acceptor |
| B | 0000287 | molecular_function | magnesium ion binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0006082 | biological_process | obsolete organic acid metabolic process |
| B | 0006083 | biological_process | acetate metabolic process |
| B | 0006085 | biological_process | acetyl-CoA biosynthetic process |
| B | 0008776 | molecular_function | acetate kinase activity |
| B | 0016301 | molecular_function | kinase activity |
| B | 0016310 | biological_process | phosphorylation |
| B | 0016774 | molecular_function | phosphotransferase activity, carboxyl group as acceptor |
| C | 0000287 | molecular_function | magnesium ion binding |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0006082 | biological_process | obsolete organic acid metabolic process |
| C | 0006083 | biological_process | acetate metabolic process |
| C | 0006085 | biological_process | acetyl-CoA biosynthetic process |
| C | 0008776 | molecular_function | acetate kinase activity |
| C | 0016301 | molecular_function | kinase activity |
| C | 0016310 | biological_process | phosphorylation |
| C | 0016774 | molecular_function | phosphotransferase activity, carboxyl group as acceptor |
| D | 0000287 | molecular_function | magnesium ion binding |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0006082 | biological_process | obsolete organic acid metabolic process |
| D | 0006083 | biological_process | acetate metabolic process |
| D | 0006085 | biological_process | acetyl-CoA biosynthetic process |
| D | 0008776 | molecular_function | acetate kinase activity |
| D | 0016301 | molecular_function | kinase activity |
| D | 0016310 | biological_process | phosphorylation |
| D | 0016774 | molecular_function | phosphotransferase activity, carboxyl group as acceptor |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 3 |
| Details | binding site for residue MPD A 501 |
| Chain | Residue |
| A | PRO118 |
| A | LEU119 |
| A | PRO232 |
| site_id | AC2 |
| Number of Residues | 7 |
| Details | binding site for residue SO4 B 401 |
| Chain | Residue |
| B | HOH625 |
| A | PHE349 |
| B | ARG203 |
| B | GLY321 |
| B | LYS375 |
| B | HOH524 |
| B | HOH577 |
| site_id | AC3 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 C 401 |
| Chain | Residue |
| C | ARG203 |
| C | LYS375 |
| C | HOH506 |
| C | HOH608 |
| D | PHE349 |
| site_id | AC4 |
| Number of Residues | 9 |
| Details | binding site for residue SO4 D 401 |
| Chain | Residue |
| D | GLY9 |
| D | SER10 |
| D | ARG91 |
| D | HIS123 |
| D | HIS180 |
| D | GLY212 |
| D | ARG241 |
| D | HOH584 |
| D | HOH612 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 D 402 |
| Chain | Residue |
| D | GLY210 |
| D | ASN211 |
| D | GLY331 |
| D | HOH514 |
| D | HOH612 |
| site_id | AC6 |
| Number of Residues | 5 |
| Details | binding site for residue SO4 D 403 |
| Chain | Residue |
| C | PHE349 |
| D | ARG203 |
| D | GLY321 |
| D | LYS375 |
| D | HOH676 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | binding site for residue MPD D 404 |
| Chain | Residue |
| D | GLU366 |
| D | MET367 |
| D | VAL368 |
Functional Information from PROSITE/UniProt
| site_id | PS01075 |
| Number of Residues | 12 |
| Details | ACETATE_KINASE_1 Acetate and butyrate kinases family signature 1. VLvLNcGSSSvK |
| Chain | Residue | Details |
| A | VAL3-LYS14 |
| site_id | PS01076 |
| Number of Residues | 18 |
| Details | ACETATE_KINASE_2 Acetate and butyrate kinases family signature 2. IItaHiGnGaSIaAiknG |
| Chain | Residue | Details |
| A | ILE204-GLY221 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 4 |
| Details | Active site: {"description":"Proton donor/acceptor","evidences":[{"source":"HAMAP-Rule","id":"MF_00020","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 56 |
| Details | Binding site: {"evidences":[{"source":"HAMAP-Rule","id":"MF_00020","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 8 |
| Details | Site: {"description":"Transition state stabilizer","evidences":[{"source":"HAMAP-Rule","id":"MF_00020","evidenceCode":"ECO:0000255"}]} |
| Chain | Residue | Details |
