6ICM

Pseudomonas putida CBB5 NdmA with ferredoxin domain of NdmD

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0009820	biological_process	alkaloid metabolic process
A	0009822	biological_process	alkaloid catabolic process
A	0016491	molecular_function	oxidoreductase activity
A	0032451	molecular_function	demethylase activity
A	0046872	molecular_function	metal ion binding
A	0051536	molecular_function	iron-sulfur cluster binding
A	0051537	molecular_function	2 iron, 2 sulfur cluster binding
A	0055114	biological_process	obsolete oxidation-reduction process
B	0009820	biological_process	alkaloid metabolic process
B	0009822	biological_process	alkaloid catabolic process
B	0016491	molecular_function	oxidoreductase activity
B	0032451	molecular_function	demethylase activity
B	0046872	molecular_function	metal ion binding
B	0051536	molecular_function	iron-sulfur cluster binding
B	0051537	molecular_function	2 iron, 2 sulfur cluster binding
B	0055114	biological_process	obsolete oxidation-reduction process
C	0009820	biological_process	alkaloid metabolic process
C	0009822	biological_process	alkaloid catabolic process
C	0016491	molecular_function	oxidoreductase activity
C	0032451	molecular_function	demethylase activity
C	0046872	molecular_function	metal ion binding
C	0051536	molecular_function	iron-sulfur cluster binding
C	0051537	molecular_function	2 iron, 2 sulfur cluster binding
C	0055114	biological_process	obsolete oxidation-reduction process
D	0051536	molecular_function	iron-sulfur cluster binding
D	0051537	molecular_function	2 iron, 2 sulfur cluster binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	6
Details	binding site for residue FES A 400

Chain	Residue
A	CYS62
A	HIS64
A	ARG65
A	CYS81
A	HIS84
A	TRP86

---

site_id	AC2
Number of Residues	4
Details	binding site for residue FE A 401

Chain	Residue
A	HOH501
A	HIS173
A	HIS178
A	ASP289

---

site_id	AC3
Number of Residues	6
Details	binding site for residue FES B 400

Chain	Residue
B	CYS62
B	HIS64
B	ARG65
B	CYS81
B	HIS84
B	TRP86

---

site_id	AC4
Number of Residues	5
Details	binding site for residue FE B 401

Chain	Residue
B	ASN167
B	HIS173
B	HIS178
B	ASP289
B	HOH501

---

site_id	AC5
Number of Residues	7
Details	binding site for residue FES C 400

Chain	Residue
C	CYS62
C	HIS64
C	ARG65
C	CYS81
C	HIS84
C	GLY85
C	TRP86

---

site_id	AC6
Number of Residues	5
Details	binding site for residue FE C 401

Chain	Residue
C	ASN167
C	HIS173
C	HIS178
C	ASP289
C	HOH501

---

site_id	AC7
Number of Residues	8
Details	binding site for residue FES D 601

Chain	Residue
D	SER536
D	CYS537
D	GLN539
D	VAL541
D	CYS542
D	GLY543
D	CYS545
D	CYS575

---

site_id	AC8
Number of Residues	7
Details	binding site for residue PG4 D 602

Chain	Residue
B	LYS319
B	ARG322
D	CYS542
D	GLY543
D	ILE546
D	TYR560
D	GLU565

---

Functional Information from PROSITE/UniProt

site_id	PS00197
Number of Residues	9
Details	2FE2S_FER_1 2Fe-2S ferredoxin-type iron-sulfur binding region signature. CEQGVCGTC

Chain	Residue	Details
D	CYS537-CYS545

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	324
Details	Domain: {"description":"Rieske","evidences":[{"source":"PROSITE-ProRule","id":"PRU00628","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	12
Details	Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00628","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	85
Details	Domain: {"description":"2Fe-2S ferredoxin-type","evidences":[{"source":"PROSITE-ProRule","id":"PRU00465","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	4
Details	Binding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---