6IAQ
Structure of Amine Dehydrogenase from Mycobacterium smegmatis
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0008839 | molecular_function | 4-hydroxy-tetrahydrodipicolinate reductase |
A | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
B | 0008839 | molecular_function | 4-hydroxy-tetrahydrodipicolinate reductase |
B | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
C | 0008839 | molecular_function | 4-hydroxy-tetrahydrodipicolinate reductase |
C | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
D | 0008839 | molecular_function | 4-hydroxy-tetrahydrodipicolinate reductase |
D | 0009089 | biological_process | lysine biosynthetic process via diaminopimelate |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 5 |
Details | binding site for residue EDO A 401 |
Chain | Residue |
A | GLU104 |
A | TYR136 |
A | PHE199 |
A | THR298 |
A | NAP402 |
site_id | AC2 |
Number of Residues | 30 |
Details | binding site for residue NAP A 402 |
Chain | Residue |
A | ALA34 |
A | ARG35 |
A | SER36 |
A | LYS39 |
A | ALA77 |
A | VAL78 |
A | ASN79 |
A | SER80 |
A | GLN88 |
A | LEU102 |
A | GLU104 |
A | THR134 |
A | TYR136 |
A | GLN137 |
A | PHE169 |
A | GLY170 |
A | PRO171 |
A | GLU172 |
A | LEU173 |
A | THR302 |
A | EDO401 |
A | HOH527 |
A | HOH540 |
A | HOH559 |
A | HOH567 |
A | HOH640 |
A | VAL11 |
A | GLY12 |
A | ALA13 |
A | MET14 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue EDO B 401 |
Chain | Residue |
B | GLU104 |
B | TYR136 |
B | PHE199 |
B | THR298 |
B | THR302 |
B | NAP402 |
site_id | AC4 |
Number of Residues | 31 |
Details | binding site for residue NAP B 402 |
Chain | Residue |
B | TYR9 |
B | VAL11 |
B | GLY12 |
B | ALA13 |
B | MET14 |
B | ARG35 |
B | SER36 |
B | LYS39 |
B | ALA77 |
B | VAL78 |
B | ASN79 |
B | SER80 |
B | GLN88 |
B | LEU102 |
B | GLU104 |
B | THR134 |
B | GLY135 |
B | TYR136 |
B | GLN137 |
B | PHE169 |
B | GLY170 |
B | PRO171 |
B | GLU172 |
B | LEU173 |
B | THR302 |
B | EDO401 |
B | HOH506 |
B | HOH515 |
B | HOH523 |
B | HOH531 |
B | HOH586 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue EDO C 401 |
Chain | Residue |
C | GLU104 |
C | TYR136 |
C | TRP164 |
C | PHE199 |
C | THR298 |
C | NAP402 |
site_id | AC6 |
Number of Residues | 29 |
Details | binding site for residue NAP C 402 |
Chain | Residue |
C | GLU172 |
C | LEU173 |
C | THR302 |
C | EDO401 |
C | HOH502 |
C | HOH507 |
C | HOH519 |
C | HOH521 |
C | GLY10 |
C | VAL11 |
C | GLY12 |
C | ALA13 |
C | MET14 |
C | ARG35 |
C | SER36 |
C | LYS39 |
C | VAL78 |
C | ASN79 |
C | SER80 |
C | GLN88 |
C | LEU102 |
C | GLU104 |
C | THR134 |
C | GLY135 |
C | TYR136 |
C | GLN137 |
C | PHE169 |
C | GLY170 |
C | PRO171 |
site_id | AC7 |
Number of Residues | 7 |
Details | binding site for residue EDO D 401 |
Chain | Residue |
D | GLU104 |
D | TYR136 |
D | TRP164 |
D | PHE199 |
D | THR298 |
D | THR302 |
D | NAP402 |
site_id | AC8 |
Number of Residues | 26 |
Details | binding site for residue NAP D 402 |
Chain | Residue |
D | VAL11 |
D | GLY12 |
D | ALA13 |
D | MET14 |
D | ARG35 |
D | SER36 |
D | LYS39 |
D | ALA77 |
D | VAL78 |
D | ASN79 |
D | SER80 |
D | GLN88 |
D | LEU102 |
D | GLU104 |
D | THR134 |
D | TYR136 |
D | GLN137 |
D | PHE169 |
D | GLY170 |
D | PRO171 |
D | GLU172 |
D | LEU173 |
D | THR302 |
D | EDO401 |
D | HOH519 |
D | HOH525 |