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6HL8

Crystal Structure of the CsiD Glutarate Hydroxylase in complex with Glutarate

Functional Information from GO Data
ChainGOidnamespacecontents
A0005506molecular_functioniron ion binding
A0008198molecular_functionferrous iron binding
A0019477biological_processL-lysine catabolic process
A0032991cellular_componentprotein-containing complex
A0042802molecular_functionidentical protein binding
A0046872molecular_functionmetal ion binding
A0050498molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated
A0051213molecular_functiondioxygenase activity
A0090549biological_processresponse to carbon starvation
A0106343molecular_functionglutarate dioxygenase activity
B0005506molecular_functioniron ion binding
B0008198molecular_functionferrous iron binding
B0019477biological_processL-lysine catabolic process
B0032991cellular_componentprotein-containing complex
B0042802molecular_functionidentical protein binding
B0046872molecular_functionmetal ion binding
B0050498molecular_functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with 2-oxoglutarate as one donor, and the other dehydrogenated
B0051213molecular_functiondioxygenase activity
B0090549biological_processresponse to carbon starvation
B0106343molecular_functionglutarate dioxygenase activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue FE2 A 401
ChainResidue
AHIS160
AASP162
AHIS292
AGUA402
AHOH611

site_idAC2
Number of Residues8
Detailsbinding site for residue GUA A 402
ChainResidue
ATYR165
AARG311
AFE2401
AHOH514
AMET157
AHIS160
AASP162
AGLY163

site_idAC3
Number of Residues5
Detailsbinding site for residue FE2 B 401
ChainResidue
BHIS160
BASP162
BHIS292
BGUA402
BHOH649

site_idAC4
Number of Residues8
Detailsbinding site for residue GUA B 402
ChainResidue
BMET157
BHIS160
BASP162
BGLY163
BTYR165
BARG311
BFE2401
BHOH529

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000269|PubMed:11910018, ECO:0000269|PubMed:30498244, ECO:0000312|PDB:1JR7, ECO:0000312|PDB:6GPE
ChainResidueDetails
AHIS160
AASP162
AHIS292
BHIS160
BASP162
BHIS292

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PDB entries from 2024-09-11

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