6HKV

Trichodysplasia spinulosa-associated polyomavirus (TSPyV) VP1 in complex with sialylated precision glycooligomers

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005198	molecular_function	structural molecule activity
A	0019028	cellular_component	viral capsid
B	0005198	molecular_function	structural molecule activity
B	0019028	cellular_component	viral capsid
C	0005198	molecular_function	structural molecule activity
C	0019028	cellular_component	viral capsid
D	0005198	molecular_function	structural molecule activity
D	0019028	cellular_component	viral capsid
E	0005198	molecular_function	structural molecule activity
E	0019028	cellular_component	viral capsid
F	0005198	molecular_function	structural molecule activity
F	0019028	cellular_component	viral capsid
G	0005198	molecular_function	structural molecule activity
G	0019028	cellular_component	viral capsid
H	0005198	molecular_function	structural molecule activity
H	0019028	cellular_component	viral capsid
I	0005198	molecular_function	structural molecule activity
I	0019028	cellular_component	viral capsid
J	0005198	molecular_function	structural molecule activity
J	0019028	cellular_component	viral capsid

Functional Information from PDB Data

site_id	AC1
Number of Residues	11
Details	binding site for residue GXB A 401

Chain	Residue
A	THR73
C	SER62
E	HIS132
A	VAL74
A	ALA75
A	GLN80
A	LYS82
A	THR84
A	HOH509
A	HOH514
A	HOH520

---

site_id	AC2
Number of Residues	11
Details	binding site for residue GXB B 401

Chain	Residue
A	ARG137
B	THR73
B	VAL74
B	ALA75
B	GLN80
B	LYS82
B	THR84
B	HOH502
B	HOH504
B	HOH566
B	HOH610

---

site_id	AC3
Number of Residues	10
Details	binding site for residue GXB C 401

Chain	Residue
B	HIS132
B	ARG137
C	THR73
C	VAL74
C	ALA75
C	GLN80
C	LYS82
C	THR84
C	HOH521
C	HOH664

---

site_id	AC4
Number of Residues	6
Details	binding site for residue MG C 402

Chain	Residue
C	GLU49
C	HOH727
D	SER219
D	HOH515
D	HOH643
D	HOH730

---

site_id	AC5
Number of Residues	4
Details	binding site for residue CL C 403

Chain	Residue
C	THR111
C	LYS298
C	HOH710
G	THR204

---

site_id	AC6
Number of Residues	13
Details	binding site for residue GXB D 401

Chain	Residue
C	ARG137
D	THR73
D	VAL74
D	ALA75
D	GLN80
D	LYS82
D	THR84
D	HOH549
D	HOH642
D	HOH687
D	HOH714
J	THR40
J	GLY41

---

site_id	AC7
Number of Residues	20
Details	binding site for residue GXB E 401

Chain	Residue
D	ARG137
E	THR73
E	VAL74
E	ALA75
E	GLN80
E	LYS82
E	PRO83
E	THR84
E	GOL402
E	HOH509
E	HOH523
E	HOH529
E	HOH552
E	HOH568
E	HOH572
E	HOH586
E	HOH628
F	THR40
F	ASP43
F	HOH684

---

site_id	AC8
Number of Residues	10
Details	binding site for residue GOL E 402

Chain	Residue
E	ASN76
E	GLN80
E	GXB401
E	HOH509
E	HOH559
E	HOH586
E	HOH615
F	VAL39
F	THR111
F	HOH538

---

site_id	AC9
Number of Residues	14
Details	binding site for residue GXB F 401

Chain	Residue
C	PRO186
F	THR73
F	VAL74
F	ALA75
F	GLN80
F	LYS82
F	HOH501
F	HOH506
F	HOH524
F	HOH650
F	HOH654
F	HOH664
F	HOH666
J	ARG137

---

site_id	AD1
Number of Residues	9
Details	binding site for residue GXB G 401

Chain	Residue
A	ASN108
F	ARG137
G	THR73
G	VAL74
G	ALA75
G	GLN80
G	LYS82
G	HOH526
G	HOH712

---

site_id	AD2
Number of Residues	6
Details	binding site for residue MG G 402

Chain	Residue
F	GLU49
F	HOH592
G	SER219
G	GLU222
G	HOH634
G	HOH703

---

site_id	AD3
Number of Residues	10
Details	binding site for residue GXB H 401

Chain	Residue
G	ARG137
H	THR73
H	VAL74
H	ALA75
H	GLN80
H	LYS82
H	THR84
H	HOH513
H	HOH522
H	HOH523

---

site_id	AD4
Number of Residues	17
Details	binding site for residue GXB I 401

Chain	Residue
C	VAL35
C	LEU36
C	ASN37
C	GLY255
C	ARG299
C	HOH526
H	ARG137
I	THR73
I	VAL74
I	ALA75
I	GLN80
I	LYS82
I	THR84
I	HOH506
I	HOH542
I	HOH624
I	HOH706

---

site_id	AD5
Number of Residues	12
Details	binding site for residue GXB J 401

Chain	Residue
I	ARG137
J	THR73
J	VAL74
J	ALA75
J	GLN80
J	LYS82
J	THR84
J	HOH2305
J	HOH2312
J	HOH2436
J	HOH2444
J	HOH2447

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