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6HCA

STRUCTURE OF GLUA2 LIGAND-BINDING DOMAIN (S1S1J) IN COMPLEX WITH POSITIVE ALLOSTERIC MODULATOR TDPAM02 AT 1.8 A RESOLUTION

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue SO4 A 301
ChainResidue
AARG148
ATRP159
AARG163
AHOH501
BLYS50

site_idAC2
Number of Residues6
Detailsbinding site for residue SO4 A 302
ChainResidue
ALYS251
AHOH440
ASER108
ASER194
AGLU198
AASN214

site_idAC3
Number of Residues4
Detailsbinding site for residue SO4 A 303
ChainResidue
ATHR91
AARG96
AHOH408
AHOH425

site_idAC4
Number of Residues5
Detailsbinding site for residue SO4 A 304
ChainResidue
ALYS116
AGOL310
AHOH453
AHOH508
BLYS82

site_idAC5
Number of Residues2
Detailsbinding site for residue SO4 A 305
ChainResidue
ALYS253
ALYS258

site_idAC6
Number of Residues5
Detailsbinding site for residue SO4 A 306
ChainResidue
AHIS23
AGLU24
AARG31
AHOH433
AHOH487

site_idAC7
Number of Residues2
Detailsbinding site for residue GOL A 307
ChainResidue
AARG163
BLYS50

site_idAC8
Number of Residues6
Detailsbinding site for residue GOL A 308
ChainResidue
AARG163
AGLU166
ASER168
APHE170
AHOH476
BGLU176

site_idAC9
Number of Residues5
Detailsbinding site for residue GOL A 309
ChainResidue
ALYS117
AGLU201
AGLN202
ACYS261
AHOH434

site_idAD1
Number of Residues5
Detailsbinding site for residue GOL A 310
ChainResidue
ALYS116
ALYS185
ASO4304
AHOH559
BILE70

site_idAD2
Number of Residues5
Detailsbinding site for residue GOL A 311
ChainResidue
AALA124
AILE152
AHOH403
AHOH505
AHOH579

site_idAD3
Number of Residues8
Detailsbinding site for residue GOL A 312
ChainResidue
AGLU176
AHOH475
AHOH585
BARG163
BGLU166
BSER168
BPHE170
BHOH445

site_idAD4
Number of Residues1
Detailsbinding site for residue CL A 313
ChainResidue
AALA153

site_idAD5
Number of Residues2
Detailsbinding site for residue CL A 314
ChainResidue
AGLN130
ATHR131

site_idAD6
Number of Residues3
Detailsbinding site for residue CL A 315
ChainResidue
ALEU26
AGLU27
AGLU30

site_idAD7
Number of Residues2
Detailsbinding site for residue CL A 316
ChainResidue
AGLU13
ASER14

site_idAD8
Number of Residues20
Detailsbinding site for residue FXW B 301
ChainResidue
ALYS104
APRO105
APHE106
AMET107
ASER108
ALYS218
AGLY219
ALEU239
AASN242
AHOH435
AHOH532
BLYS104
BPRO105
BPHE106
BMET107
BSER108
BLYS218
BGLY219
BASN242
BHOH458

site_idAD9
Number of Residues5
Detailsbinding site for residue SO4 B 302
ChainResidue
AARG172
BASP139
BSER140
BLYS144
BARG148

site_idAE1
Number of Residues9
Detailsbinding site for residue SO4 B 303
ChainResidue
BHOH462
BSER108
BSER194
BGLU198
BASN214
BLYS251
BHOH404
BHOH409
BHOH410

site_idAE2
Number of Residues4
Detailsbinding site for residue SO4 B 304
ChainResidue
BARG148
BTRP159
BARG163
BHOH557

site_idAE3
Number of Residues5
Detailsbinding site for residue SO4 B 305
ChainResidue
BHIS23
BGLU24
BARG31
BHIS46
BLYS240

site_idAE4
Number of Residues3
Detailsbinding site for residue GOL B 306
ChainResidue
BLYS117
BGLN202
BHOH439

site_idAE5
Number of Residues1
Detailsbinding site for residue CL B 307
ChainResidue
BGLU27

site_idAE6
Number of Residues1
Detailsbinding site for residue CL B 308
ChainResidue
BALA153

site_idAE7
Number of Residues5
Detailsbinding site for residue PEG B 309
ChainResidue
BTYR61
BPRO89
BLEU90
BTHR91
BARG96

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:11086992, ECO:0000269|PubMed:16483599, ECO:0007744|PDB:1FTJ, ECO:0007744|PDB:2CMO
ChainResidueDetails
APRO89
BSER142
BTHR143
BGLU193
ATHR91
AARG96
ASER142
ATHR143
AGLU193
BPRO89
BTHR91
BARG96

site_idSWS_FT_FI2
Number of Residues6
DetailsSITE: Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
ChainResidueDetails
AARG64
AARG148
ALYS240
BARG64
BARG148
BLYS240

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
ChainResidueDetails
AILE121
BILE121

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER150
BSER150

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER184
BSER184

site_idSWS_FT_FI6
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN3
BASN3

223166

PDB entries from 2024-07-31

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