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6HC9

STRUCTURE OF GLUA2 LIGAND-BINDING DOMAIN (S1S2J-L504Y-N775S) IN COMPLEX WITH GLUTAMATE AND TDPAM02 AT 2.4 A RESOLUTION.

Functional Information from GO Data
ChainGOidnamespacecontents
A0015276molecular_functionligand-gated monoatomic ion channel activity
A0016020cellular_componentmembrane
B0015276molecular_functionligand-gated monoatomic ion channel activity
B0016020cellular_componentmembrane
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue GOL A 301
ChainResidue
AGLY62
AALA63
ATRP71
ATHR93
AARG96
AGLU145

site_idAC2
Number of Residues1
Detailsbinding site for residue CL A 302
ChainResidue
ATHR5

site_idAC3
Number of Residues11
Detailsbinding site for residue GLU A 303
ChainResidue
ALEU90
ATHR91
AARG96
AGLY141
ASER142
ATHR143
AGLU193
AHOH407
AHOH455
ATYR61
APRO89

site_idAC4
Number of Residues5
Detailsbinding site for residue SO4 A 304
ChainResidue
AALA63
ASER140
ALYS144
AARG148
AHOH416

site_idAC5
Number of Residues3
Detailsbinding site for residue SO4 A 305
ChainResidue
AHIS46
ALYS240
AGLN244

site_idAC6
Number of Residues3
Detailsbinding site for residue SO4 A 306
ChainResidue
AMET19
AHIS23
BLYS258

site_idAC7
Number of Residues6
Detailsbinding site for residue PEG A 307
ChainResidue
ATYR80
ALYS117
AGLY118
ATHR119
ALYS185
AGLY186

site_idAC8
Number of Residues7
Detailsbinding site for residue PEG A 308
ChainResidue
AILE11
ALEU12
AGLU13
AILE55
AGLY59
ATHR173
ATHR174

site_idAC9
Number of Residues5
Detailsbinding site for residue PGE A 309
ChainResidue
ALYS144
AARG148
ATRP159
AARG163
AHOH479

site_idAD1
Number of Residues1
Detailsbinding site for residue CL B 301
ChainResidue
BASN29

site_idAD2
Number of Residues1
Detailsbinding site for residue CL B 302
ChainResidue
BASN22

site_idAD3
Number of Residues3
Detailsbinding site for residue CL B 303
ChainResidue
AGLU243
BTHR93
BTYR94

site_idAD4
Number of Residues2
Detailsbinding site for residue CL B 304
ChainResidue
BLYS50
BTYR51

site_idAD5
Number of Residues2
Detailsbinding site for residue CL B 305
ChainResidue
BMET18
BMET19

site_idAD6
Number of Residues1
Detailsbinding site for residue CL B 306
ChainResidue
BALA153

site_idAD7
Number of Residues13
Detailsbinding site for residue GLU B 307
ChainResidue
BTYR61
BPRO89
BLEU90
BTHR91
BARG96
BLEU138
BGLY141
BSER142
BTHR143
BGLU193
BTYR220
BHOH431
BHOH450

site_idAD8
Number of Residues6
Detailsbinding site for residue SO4 B 308
ChainResidue
BALA63
BASP139
BSER140
BLYS144
BARG148
BHOH403

site_idAD9
Number of Residues2
Detailsbinding site for residue SO4 B 309
ChainResidue
BARG31
BHOH413

site_idAE1
Number of Residues4
Detailsbinding site for residue SO4 B 310
ChainResidue
BHIS46
BPRO167
BGLN244
BHOH416

site_idAE2
Number of Residues3
Detailsbinding site for residue SO4 B 311
ChainResidue
ALYS240
BTYR94
BARG149

site_idAE3
Number of Residues3
Detailsbinding site for residue SO4 B 312
ChainResidue
BARG148
BTRP159
BARG163

site_idAE4
Number of Residues20
Detailsbinding site for residue FXW B 313
ChainResidue
BPRO105
BPHE106
BMET107
BSER108
BSER217
BLYS218
BGLY219
BSER242
BHOH401
ALYS104
APRO105
APHE106
AMET107
ASER108
ASER217
ALYS218
AGLY219
ALEU239
ASER242
BLYS104

site_idAE5
Number of Residues1
Detailsbinding site for residue PEG B 314
ChainResidue
BGLU125

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues12
DetailsBINDING: BINDING => ECO:0000269|PubMed:11086992, ECO:0000269|PubMed:16483599, ECO:0007744|PDB:1FTJ, ECO:0007744|PDB:2CMO
ChainResidueDetails
APRO89
BSER142
BTHR143
BGLU193
ATHR91
AARG96
ASER142
ATHR143
AGLU193
BPRO89
BTHR91
BARG96

site_idSWS_FT_FI2
Number of Residues6
DetailsSITE: Interaction with the cone snail toxin Con-ikot-ikot => ECO:0000269|PubMed:25103405
ChainResidueDetails
AARG64
AARG148
ALYS240
BARG64
BARG148
BLYS240

site_idSWS_FT_FI3
Number of Residues2
DetailsSITE: Crucial to convey clamshell closure to channel opening => ECO:0000269|PubMed:25103405
ChainResidueDetails
AILE121
BILE121

site_idSWS_FT_FI4
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKC => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER150
BSER150

site_idSWS_FT_FI5
Number of Residues2
DetailsMOD_RES: Phosphoserine; by PKG => ECO:0000269|PubMed:8848293
ChainResidueDetails
ASER184
BSER184

site_idSWS_FT_FI6
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN3
BASN3

222415

PDB entries from 2024-07-10

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