6HB4
TFAM in Complex with Site-Y
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue GOL A 301 |
Chain | Residue |
A | THR150 |
A | LYS154 |
A | LYS156 |
C | DT7 |
site_id | AC2 |
Number of Residues | 1 |
Details | binding site for residue GOL A 302 |
Chain | Residue |
A | GLU214 |
site_id | AC3 |
Number of Residues | 6 |
Details | binding site for residue 1PE A 303 |
Chain | Residue |
F | DC4 |
F | DA5 |
A | HIS137 |
A | LEU138 |
A | LYS141 |
E | DA22 |
site_id | AC4 |
Number of Residues | 2 |
Details | binding site for residue 1PE A 304 |
Chain | Residue |
A | LYS118 |
A | GLU130 |
site_id | AC5 |
Number of Residues | 5 |
Details | binding site for residue 1PE D 301 |
Chain | Residue |
D | ILE114 |
D | LYS118 |
D | ILE126 |
D | LEU129 |
D | GLU130 |
site_id | AC6 |
Number of Residues | 3 |
Details | binding site for residue 1PE G 301 |
Chain | Residue |
G | LYS118 |
G | ILE126 |
G | GLU130 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 272 |
Details | DNA_BIND: HMG box 1 => ECO:0000255|PROSITE-ProRule:PRU00267 |
Chain | Residue | Details |
A | PRO50-LYS118 | |
D | PRO50-LYS118 | |
G | PRO50-LYS118 | |
J | PRO50-LYS118 |
site_id | SWS_FT_FI2 |
Number of Residues | 256 |
Details | DNA_BIND: HMG box 2 => ECO:0000255|PROSITE-ProRule:PRU00267 |
Chain | Residue | Details |
A | PRO155-GLU219 | |
D | PRO155-GLU219 | |
G | PRO155-GLU219 | |
J | PRO155-GLU219 |
site_id | SWS_FT_FI3 |
Number of Residues | 8 |
Details | SITE: Intercalates between bases and promotes DNA bending |
Chain | Residue | Details |
A | LEU58 | |
A | LEU182 | |
D | LEU58 | |
D | LEU182 | |
G | LEU58 | |
G | LEU182 | |
J | LEU58 | |
J | LEU182 |
site_id | SWS_FT_FI4 |
Number of Residues | 16 |
Details | MOD_RES: Phosphoserine; by PKA => ECO:0000269|PubMed:23201127 |
Chain | Residue | Details |
A | SER55 | |
G | SER56 | |
G | SER61 | |
G | SER160 | |
J | SER55 | |
J | SER56 | |
J | SER61 | |
J | SER160 | |
A | SER56 | |
A | SER61 | |
A | SER160 | |
D | SER55 | |
D | SER56 | |
D | SER61 | |
D | SER160 | |
G | SER55 |
site_id | SWS_FT_FI5 |
Number of Residues | 4 |
Details | MOD_RES: Phosphothreonine => ECO:0007744|PubMed:23186163 |
Chain | Residue | Details |
A | THR122 | |
D | THR122 | |
G | THR122 | |
J | THR122 |
site_id | SWS_FT_FI6 |
Number of Residues | 4 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:23186163 |
Chain | Residue | Details |
A | SER193 | |
D | SER193 | |
G | SER193 | |
J | SER193 |
site_id | SWS_FT_FI7 |
Number of Residues | 4 |
Details | MOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163 |
Chain | Residue | Details |
A | SER195 | |
D | SER195 | |
G | SER195 | |
J | SER195 |