6H9F
Structure of glutamate mutase reconstituted with bishomo-coenzyme B12
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005515 | molecular_function | protein binding |
A | 0016853 | molecular_function | isomerase activity |
A | 0016866 | molecular_function | intramolecular transferase activity |
A | 0019553 | biological_process | glutamate catabolic process via L-citramalate |
A | 0019670 | biological_process | anaerobic glutamate catabolic process |
A | 0031419 | molecular_function | cobalamin binding |
A | 0046872 | molecular_function | metal ion binding |
A | 0050097 | molecular_function | methylaspartate mutase activity |
B | 0003824 | molecular_function | catalytic activity |
B | 0005515 | molecular_function | protein binding |
B | 0016853 | molecular_function | isomerase activity |
B | 0016866 | molecular_function | intramolecular transferase activity |
B | 0019553 | biological_process | glutamate catabolic process via L-citramalate |
B | 0019670 | biological_process | anaerobic glutamate catabolic process |
B | 0031419 | molecular_function | cobalamin binding |
B | 0050097 | molecular_function | methylaspartate mutase activity |
C | 0005515 | molecular_function | protein binding |
C | 0016853 | molecular_function | isomerase activity |
C | 0016866 | molecular_function | intramolecular transferase activity |
C | 0019553 | biological_process | glutamate catabolic process via L-citramalate |
C | 0019670 | biological_process | anaerobic glutamate catabolic process |
C | 0031419 | molecular_function | cobalamin binding |
C | 0046872 | molecular_function | metal ion binding |
C | 0050097 | molecular_function | methylaspartate mutase activity |
D | 0003824 | molecular_function | catalytic activity |
D | 0005515 | molecular_function | protein binding |
D | 0016853 | molecular_function | isomerase activity |
D | 0016866 | molecular_function | intramolecular transferase activity |
D | 0019553 | biological_process | glutamate catabolic process via L-citramalate |
D | 0019670 | biological_process | anaerobic glutamate catabolic process |
D | 0031419 | molecular_function | cobalamin binding |
D | 0050097 | molecular_function | methylaspartate mutase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 49 |
Details | binding site for residue B12 A 201 |
Chain | Residue |
A | SER13 |
A | LEU63 |
A | TYR64 |
A | GLY65 |
A | GLY91 |
A | GLY92 |
A | ASN93 |
A | VAL95 |
A | VAL96 |
A | GLY97 |
A | TYR117 |
A | ASP14 |
A | THR121 |
A | PRO123 |
A | HOH302 |
A | HOH306 |
A | HOH318 |
A | HOH332 |
A | HOH333 |
A | HOH336 |
A | HOH341 |
A | HOH378 |
A | CYS15 |
B | ILE95 |
B | ALA97 |
B | ARG100 |
B | ASN123 |
B | PRO180 |
B | LEU219 |
B | THR220 |
B | MET294 |
B | GLY295 |
B | GLY296 |
A | HIS16 |
B | PHE297 |
B | HIS329 |
B | GLU330 |
B | GLY333 |
B | ILE334 |
B | PRO410 |
B | PHE471 |
B | 8ZB501 |
B | TAR502 |
B | HOH831 |
A | ALA17 |
A | VAL18 |
A | GLY19 |
A | LEU23 |
A | SER61 |
site_id | AC2 |
Number of Residues | 14 |
Details | binding site for residue 8ZB B 501 |
Chain | Residue |
A | B12201 |
B | ARG66 |
B | ALA67 |
B | GLY68 |
B | THR94 |
B | ASN123 |
B | LYS326 |
B | GLU330 |
B | ILE334 |
B | PRO335 |
B | TAR502 |
B | HOH760 |
B | HOH810 |
B | HOH895 |
site_id | AC3 |
Number of Residues | 12 |
Details | binding site for residue TAR B 502 |
Chain | Residue |
A | B12201 |
B | ARG66 |
B | THR94 |
B | ARG100 |
B | ARG149 |
B | HIS150 |
B | GLU171 |
B | TYR177 |
B | TYR181 |
B | PHE216 |
B | 8ZB501 |
B | HOH769 |
site_id | AC4 |
Number of Residues | 51 |
Details | binding site for residue B12 C 201 |
Chain | Residue |
C | HOH312 |
C | HOH319 |
C | HOH340 |
C | HOH360 |
D | ILE95 |
D | ALA97 |
D | ARG100 |
D | ASN123 |
D | PRO180 |
D | TYR181 |
D | LEU219 |
D | THR220 |
D | MET294 |
D | GLY295 |
D | GLY296 |
D | PHE297 |
D | HIS329 |
D | GLU330 |
D | ALA331 |
D | GLY333 |
D | ILE334 |
D | PRO410 |
D | PHE471 |
D | 8ZB501 |
D | TAR502 |
D | HOH776 |
D | HOH790 |
C | SER13 |
C | ASP14 |
C | CYS15 |
C | HIS16 |
C | ALA17 |
C | VAL18 |
C | GLY19 |
C | LEU23 |
C | SER61 |
C | LEU63 |
C | TYR64 |
C | GLY65 |
C | GLY91 |
C | GLY92 |
C | ASN93 |
C | VAL95 |
C | VAL96 |
C | GLY97 |
C | TYR117 |
C | THR121 |
C | PRO123 |
C | HOH301 |
C | HOH305 |
C | HOH310 |
site_id | AC5 |
Number of Residues | 14 |
Details | binding site for residue 8ZB D 501 |
Chain | Residue |
C | B12201 |
D | ARG66 |
D | ALA67 |
D | GLY68 |
D | THR94 |
D | ASN123 |
D | LYS326 |
D | GLU330 |
D | ILE334 |
D | PRO335 |
D | TAR502 |
D | HOH698 |
D | HOH740 |
D | HOH932 |
site_id | AC6 |
Number of Residues | 12 |
Details | binding site for residue TAR D 502 |
Chain | Residue |
C | B12201 |
D | ARG66 |
D | THR94 |
D | ARG100 |
D | ARG149 |
D | HIS150 |
D | GLU171 |
D | TYR177 |
D | TYR181 |
D | PHE216 |
D | 8ZB501 |
D | HOH696 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 26 |
Details | BINDING: |
Chain | Residue | Details |
B | ARG66 | |
B | PHE297 | |
B | LYS326 | |
B | GLU330 | |
B | ILE334 | |
D | ARG66 | |
D | GLY68 | |
D | ARG100 | |
D | ASN123 | |
D | ARG149 | |
D | GLU171 | |
B | GLY68 | |
D | TYR177 | |
D | PRO180 | |
D | TYR181 | |
D | PHE297 | |
D | LYS326 | |
D | GLU330 | |
D | ILE334 | |
B | ARG100 | |
B | ASN123 | |
B | ARG149 | |
B | GLU171 | |
B | TYR177 | |
B | PRO180 | |
B | TYR181 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | BINDING: axial binding residue |
Chain | Residue | Details |
A | HIS16 | |
C | HIS16 |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 2 |
Details | M-CSA 63 |
Chain | Residue | Details |
B | ARG100 | electrostatic stabiliser |
B | GLU171 | electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
site_id | MCSA2 |
Number of Residues | 2 |
Details | M-CSA 63 |
Chain | Residue | Details |
D | ARG100 | electrostatic stabiliser |
D | GLU171 | electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |