6H9E
Structure of glutamate mutase reconstituted with homo-coenzyme B12
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005515 | molecular_function | protein binding |
A | 0016853 | molecular_function | isomerase activity |
A | 0016866 | molecular_function | intramolecular transferase activity |
A | 0019553 | biological_process | glutamate catabolic process via L-citramalate |
A | 0019670 | biological_process | anaerobic glutamate catabolic process |
A | 0031419 | molecular_function | cobalamin binding |
A | 0046872 | molecular_function | metal ion binding |
A | 0050097 | molecular_function | methylaspartate mutase activity |
B | 0003824 | molecular_function | catalytic activity |
B | 0005515 | molecular_function | protein binding |
B | 0016853 | molecular_function | isomerase activity |
B | 0016866 | molecular_function | intramolecular transferase activity |
B | 0019553 | biological_process | glutamate catabolic process via L-citramalate |
B | 0019670 | biological_process | anaerobic glutamate catabolic process |
B | 0031419 | molecular_function | cobalamin binding |
B | 0050097 | molecular_function | methylaspartate mutase activity |
C | 0005515 | molecular_function | protein binding |
C | 0016853 | molecular_function | isomerase activity |
C | 0016866 | molecular_function | intramolecular transferase activity |
C | 0019553 | biological_process | glutamate catabolic process via L-citramalate |
C | 0019670 | biological_process | anaerobic glutamate catabolic process |
C | 0031419 | molecular_function | cobalamin binding |
C | 0046872 | molecular_function | metal ion binding |
C | 0050097 | molecular_function | methylaspartate mutase activity |
D | 0003824 | molecular_function | catalytic activity |
D | 0005515 | molecular_function | protein binding |
D | 0016853 | molecular_function | isomerase activity |
D | 0016866 | molecular_function | intramolecular transferase activity |
D | 0019553 | biological_process | glutamate catabolic process via L-citramalate |
D | 0019670 | biological_process | anaerobic glutamate catabolic process |
D | 0031419 | molecular_function | cobalamin binding |
D | 0050097 | molecular_function | methylaspartate mutase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 49 |
Details | binding site for residue B12 A 201 |
Chain | Residue |
A | SER13 |
A | LEU63 |
A | TYR64 |
A | GLY65 |
A | GLY91 |
A | GLY92 |
A | ASN93 |
A | VAL95 |
A | VAL96 |
A | GLY97 |
A | TYR117 |
A | ASP14 |
A | THR121 |
A | PRO123 |
A | HOH315 |
A | HOH323 |
A | HOH326 |
A | HOH333 |
A | HOH343 |
A | HOH356 |
A | HOH360 |
B | ILE95 |
A | CYS15 |
B | ALA97 |
B | ARG100 |
B | ASN123 |
B | PRO180 |
B | LEU219 |
B | THR220 |
B | MET294 |
B | GLY295 |
B | GLY296 |
B | PHE297 |
A | HIS16 |
B | HIS329 |
B | GLU330 |
B | GLY333 |
B | ILE334 |
B | PRO410 |
B | PHE471 |
B | FWK501 |
B | TAR502 |
B | HOH820 |
B | HOH865 |
A | ALA17 |
A | VAL18 |
A | GLY19 |
A | LEU23 |
A | SER61 |
site_id | AC2 |
Number of Residues | 14 |
Details | binding site for residue FWK B 501 |
Chain | Residue |
A | B12201 |
B | ARG66 |
B | ALA67 |
B | GLY68 |
B | THR94 |
B | ASN123 |
B | LYS326 |
B | GLU330 |
B | ILE334 |
B | PRO335 |
B | TAR502 |
B | HOH753 |
B | HOH793 |
B | HOH976 |
site_id | AC3 |
Number of Residues | 11 |
Details | binding site for residue TAR B 502 |
Chain | Residue |
A | B12201 |
B | ARG66 |
B | ARG100 |
B | ARG149 |
B | HIS150 |
B | GLU171 |
B | TYR177 |
B | TYR181 |
B | PHE216 |
B | FWK501 |
B | HOH792 |
site_id | AC4 |
Number of Residues | 10 |
Details | binding site for residue GOL B 503 |
Chain | Residue |
A | LYS21 |
B | PRO407 |
B | PHE408 |
B | GLY416 |
B | MET418 |
B | PRO420 |
B | PHE463 |
B | HOH624 |
B | HOH870 |
B | HOH941 |
site_id | AC5 |
Number of Residues | 4 |
Details | binding site for residue GOL B 504 |
Chain | Residue |
B | GLU274 |
B | HOH613 |
B | HOH735 |
B | HOH843 |
site_id | AC6 |
Number of Residues | 49 |
Details | binding site for residue B12 C 201 |
Chain | Residue |
C | GLY91 |
C | GLY92 |
C | ASN93 |
C | VAL95 |
C | VAL96 |
C | GLY97 |
C | THR121 |
C | PRO123 |
C | HOH302 |
C | HOH314 |
C | HOH324 |
C | HOH333 |
C | HOH342 |
C | HOH349 |
C | HOH352 |
C | HOH389 |
D | ILE95 |
D | ALA97 |
D | ARG100 |
D | ASN123 |
D | PRO180 |
D | LEU219 |
D | THR220 |
D | MET294 |
D | GLY295 |
D | GLY296 |
D | PHE297 |
D | HIS329 |
D | GLU330 |
D | ALA331 |
D | GLY333 |
D | ILE334 |
D | PRO410 |
D | PHE471 |
D | FWK501 |
D | TAR502 |
D | HOH863 |
D | HOH875 |
C | SER13 |
C | ASP14 |
C | CYS15 |
C | HIS16 |
C | ALA17 |
C | VAL18 |
C | LEU23 |
C | SER61 |
C | LEU63 |
C | TYR64 |
C | GLY65 |
site_id | AC7 |
Number of Residues | 6 |
Details | binding site for residue GOL C 202 |
Chain | Residue |
C | PRO123 |
C | GLU124 |
C | HOH323 |
C | HOH377 |
D | PHE471 |
D | LYS475 |
site_id | AC8 |
Number of Residues | 14 |
Details | binding site for residue FWK D 501 |
Chain | Residue |
C | B12201 |
D | ARG66 |
D | ALA67 |
D | GLY68 |
D | THR94 |
D | ASN123 |
D | LYS326 |
D | GLU330 |
D | ILE334 |
D | PRO335 |
D | TAR502 |
D | HOH710 |
D | HOH766 |
D | HOH982 |
site_id | AC9 |
Number of Residues | 11 |
Details | binding site for residue TAR D 502 |
Chain | Residue |
C | B12201 |
D | ARG66 |
D | ARG100 |
D | ARG149 |
D | HIS150 |
D | GLU171 |
D | TYR177 |
D | TYR181 |
D | PHE216 |
D | FWK501 |
D | HOH762 |
site_id | AD1 |
Number of Residues | 10 |
Details | binding site for residue GOL D 503 |
Chain | Residue |
D | PRO407 |
D | PHE408 |
D | GLY416 |
D | MET418 |
D | MET419 |
D | PRO420 |
D | PHE463 |
D | HOH612 |
D | HOH881 |
D | HOH900 |
site_id | AD2 |
Number of Residues | 5 |
Details | binding site for residue GOL D 504 |
Chain | Residue |
D | MET1 |
D | GLU12 |
D | LYS15 |
D | GLN16 |
D | GLU19 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 26 |
Details | BINDING: |
Chain | Residue | Details |
B | ARG66 | |
B | PHE297 | |
B | LYS326 | |
B | GLU330 | |
B | ILE334 | |
D | ARG66 | |
D | GLY68 | |
D | ARG100 | |
D | ASN123 | |
D | ARG149 | |
D | GLU171 | |
B | GLY68 | |
D | TYR177 | |
D | PRO180 | |
D | TYR181 | |
D | PHE297 | |
D | LYS326 | |
D | GLU330 | |
D | ILE334 | |
B | ARG100 | |
B | ASN123 | |
B | ARG149 | |
B | GLU171 | |
B | TYR177 | |
B | PRO180 | |
B | TYR181 |
site_id | SWS_FT_FI2 |
Number of Residues | 2 |
Details | BINDING: axial binding residue |
Chain | Residue | Details |
A | HIS16 | |
C | HIS16 |
Catalytic Information from CSA
site_id | MCSA1 |
Number of Residues | 2 |
Details | M-CSA 63 |
Chain | Residue | Details |
B | ARG100 | electrostatic stabiliser |
B | GLU171 | electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |
site_id | MCSA2 |
Number of Residues | 2 |
Details | M-CSA 63 |
Chain | Residue | Details |
D | ARG100 | electrostatic stabiliser |
D | GLU171 | electrostatic stabiliser, hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor |