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6H8O

Crystal structure of the Master-Rep protein nuclease domain from the Faba Bean Necrotic Yellows Virus

Functional Information from GO Data
ChainGOidnamespacecontents
A0006260biological_processDNA replication
B0006260biological_processDNA replication
Functional Information from PDB Data
site_idAC1
Number of Residues11
Detailsbinding site for residue SO4 A 101
ChainResidue
AGLY35
BPRO62
BGLY63
AGLU36
AHIS41
AHOH211
AHOH214
AHOH215
AHOH220
AHOH225
AHOH238

site_idAC2
Number of Residues5
Detailsbinding site for residue SO4 A 102
ChainResidue
AVAL5
AILE6
ACYS7
AHOH212
AHOH242

site_idAC3
Number of Residues4
Detailsbinding site for residue SO4 A 103
ChainResidue
AHIS22
AASP23
BHIS22
BASP23

site_idAC4
Number of Residues11
Detailsbinding site for residue SO4 B 101
ChainResidue
APRO62
AGLY63
BGLY35
BGLU36
BHIS41
BHOH202
BHOH212
BHOH225
BHOH240
BHOH243
BHOH247

site_idAC5
Number of Residues6
Detailsbinding site for residue SO4 B 102
ChainResidue
BVAL5
BILE6
BCYS7
BHOH214
BHOH246
BHOH272

site_idAC6
Number of Residues4
Detailsbinding site for residue SO4 B 103
ChainResidue
AARG70
BARG69
BGLY71
BHOH279

site_idAC7
Number of Residues4
Detailsbinding site for residue SO4 B 104
ChainResidue
AARG69
AGLY71
AHOH275
BARG70

site_idAC8
Number of Residues4
Detailsbinding site for residue SO4 B 105
ChainResidue
AARG70
AGLY71
BARG70
BGLY71

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsMotif: {"description":"RCR-1","evidences":[{"source":"PROSITE-ProRule","id":"PRU01364","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues4
DetailsMotif: {"description":"RCR-2","evidences":[{"source":"PROSITE-ProRule","id":"PRU01364","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues40
DetailsMotif: {"description":"Nuclear localization signal","evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues6
DetailsMotif: {"description":"RCR-3","evidences":[{"source":"PROSITE-ProRule","id":"PRU01364","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues2
DetailsActive site: {"description":"For DNA cleavage activity","evidences":[{"source":"PROSITE-ProRule","id":"PRU01364","evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues6
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000255"}]}
ChainResidueDetails

247947

PDB entries from 2026-01-21

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