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6H6V

Structure of the UbiD-class enzyme HmfF from Pelotomaculum thermopropionicum in complex with FMN

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0016831molecular_functioncarboxy-lyase activity
A0046872molecular_functionmetal ion binding
B0000166molecular_functionnucleotide binding
B0016831molecular_functioncarboxy-lyase activity
B0046872molecular_functionmetal ion binding
C0000166molecular_functionnucleotide binding
C0016831molecular_functioncarboxy-lyase activity
C0046872molecular_functionmetal ion binding
D0000166molecular_functionnucleotide binding
D0016831molecular_functioncarboxy-lyase activity
D0046872molecular_functionmetal ion binding
E0000166molecular_functionnucleotide binding
E0016831molecular_functioncarboxy-lyase activity
E0046872molecular_functionmetal ion binding
F0000166molecular_functionnucleotide binding
F0016831molecular_functioncarboxy-lyase activity
F0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues19
Detailsbinding site for residue FMN A 501
ChainResidue
AASN147
ASER200
AGLN201
AGLU210
AHIS296
AK502
AMN503
AHOH603
AHOH616
AHOH619
AHOH628
ASER149
AILE150
AHIS151
AARG152
ALEU164
ALEU166
AARG168
AHIS169

site_idAC2
Number of Residues7
Detailsbinding site for residue K A 502
ChainResidue
AVAL148
ASER200
AALA202
AGLU210
AFMN501
AMN503
AHOH619

site_idAC3
Number of Residues6
Detailsbinding site for residue MN A 503
ChainResidue
AASN147
AHIS169
AGLU210
AFMN501
AK502
AHOH619

site_idAC4
Number of Residues4
Detailsbinding site for residue CA A 504
ChainResidue
AARG385
AASP391
AASP418
ATHR420

site_idAC5
Number of Residues20
Detailsbinding site for residue FMN B 501
ChainResidue
BASN147
BSER149
BILE150
BHIS151
BARG152
BLEU164
BLEU166
BARG168
BHIS169
BSER200
BGLN201
BGLU210
BHIS296
BK502
BMN503
BHOH607
BHOH608
BHOH621
BHOH624
BHOH641

site_idAC6
Number of Residues6
Detailsbinding site for residue K B 502
ChainResidue
BVAL148
BSER200
BALA202
BGLU210
BFMN501
BMN503

site_idAC7
Number of Residues7
Detailsbinding site for residue MN B 503
ChainResidue
BASN147
BHIS169
BGLU210
BFMN501
BK502
BHOH624
BHOH625

site_idAC8
Number of Residues5
Detailsbinding site for residue CA B 504
ChainResidue
BARG385
BASP391
BASP418
BTHR420
BHOH648

site_idAC9
Number of Residues19
Detailsbinding site for residue FMN C 501
ChainResidue
CASN147
CSER149
CILE150
CHIS151
CARG152
CLEU164
CLEU166
CARG168
CHIS169
CSER200
CGLN201
CGLU210
CHIS296
CK502
CMN503
CHOH606
CHOH621
CHOH624
CHOH626

site_idAD1
Number of Residues7
Detailsbinding site for residue K C 502
ChainResidue
CHOH621
CVAL148
CSER200
CALA202
CGLU210
CFMN501
CMN503

site_idAD2
Number of Residues6
Detailsbinding site for residue MN C 503
ChainResidue
CASN147
CHIS169
CGLU210
CFMN501
CK502
CHOH621

site_idAD3
Number of Residues5
Detailsbinding site for residue CA C 504
ChainResidue
CARG385
CASP391
CASP418
CTHR420
CHOH602

site_idAD4
Number of Residues21
Detailsbinding site for residue FMN D 501
ChainResidue
DASN147
DSER149
DILE150
DHIS151
DARG152
DLEU164
DLEU166
DARG168
DHIS169
DSER200
DGLN201
DGLU210
DHIS296
DLEU299
DK502
DMN503
DHOH607
DHOH608
DHOH625
DHOH629
DHOH630

site_idAD5
Number of Residues6
Detailsbinding site for residue K D 502
ChainResidue
DVAL148
DSER200
DALA202
DGLU210
DFMN501
DMN503

site_idAD6
Number of Residues7
Detailsbinding site for residue MN D 503
ChainResidue
DASN147
DHIS169
DGLU210
DFMN501
DK502
DHOH610
DHOH629

site_idAD7
Number of Residues5
Detailsbinding site for residue CA D 504
ChainResidue
DARG385
DASP391
DASP418
DTHR420
DHOH624

site_idAD8
Number of Residues20
Detailsbinding site for residue FMN E 501
ChainResidue
EASN147
EVAL148
ESER149
EILE150
EHIS151
EARG152
ELEU164
ELEU166
EARG168
EHIS169
ESER200
EGLN201
EGLU210
EHIS296
EK502
EMN503
EHOH605
EHOH606
EHOH625
EHOH627

site_idAD9
Number of Residues5
Detailsbinding site for residue K E 502
ChainResidue
EVAL148
ESER200
EALA202
EGLU210
EFMN501

site_idAE1
Number of Residues6
Detailsbinding site for residue MN E 503
ChainResidue
EASN147
EHIS169
EGLU210
EFMN501
EHOH618
EHOH627

site_idAE2
Number of Residues5
Detailsbinding site for residue CA E 504
ChainResidue
EARG385
EASP391
EASP418
ETHR420
EHOH612

site_idAE3
Number of Residues18
Detailsbinding site for residue FMN F 501
ChainResidue
FASN147
FVAL148
FSER149
FILE150
FHIS151
FARG152
FLEU164
FLEU166
FARG168
FHIS169
FSER200
FGLN201
FGLU210
FHIS296
FK502
FMN503
FHOH604
FHOH618

site_idAE4
Number of Residues6
Detailsbinding site for residue K F 502
ChainResidue
FVAL148
FSER200
FALA202
FGLU210
FFMN501
FMN503

site_idAE5
Number of Residues6
Detailsbinding site for residue MN F 503
ChainResidue
FASN147
FHIS169
FGLU210
FFMN501
FK502
FHOH608

site_idAE6
Number of Residues4
Detailsbinding site for residue CA F 504
ChainResidue
FARG385
FASP391
FASP418
FTHR420

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PDB entries from 2024-07-24

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