Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6H3A

Crystal structure of the KAP1 RBCC domain in complex with the SMARCAD1 CUE1 domain.

Functional Information from GO Data
ChainGOidnamespacecontents
A0008270molecular_functionzinc ion binding
B0043130molecular_functionubiquitin binding
D0043130molecular_functionubiquitin binding
F0008270molecular_functionzinc ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 1001
ChainResidue
ACYS65
ACYS68
ACYS88
ACYS91

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 1002
ChainResidue
ACYS83
AHIS85
ACYS117
ACYS120

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN A 1003
ChainResidue
AHIS212
ACYS229
ACYS232
ACYS209

site_idAC4
Number of Residues5
Detailsbinding site for residue ZN A 1004
ChainResidue
ACYS221
ASER223
ACYS224
AHIS237
AHIS240

site_idAC5
Number of Residues4
Detailsbinding site for residue ZN F 501
ChainResidue
FCYS209
FHIS212
FCYS229
FCYS232

site_idAC6
Number of Residues4
Detailsbinding site for residue ZN F 502
ChainResidue
FCYS221
FCYS224
FHIS237
FHIS240

site_idAC7
Number of Residues4
Detailsbinding site for residue ZN F 503
ChainResidue
FCYS65
FCYS68
FCYS88
FCYS91

site_idAC8
Number of Residues5
Detailsbinding site for residue ZN F 504
ChainResidue
FCYS83
FHIS85
FCYS117
FVAL119
FCYS120

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues112
DetailsZN_FING: RING-type => ECO:0000255|PROSITE-ProRule:PRU00175
ChainResidueDetails
ACYS65-LYS121
FCYS65-LYS121
BSER124
BSER127

site_idSWS_FT_FI2
Number of Residues94
DetailsZN_FING: B box-type 1; atypical => ECO:0000255|PROSITE-ProRule:PRU00024
ChainResidueDetails
AASP148-THR195
FASP148-THR195

site_idSWS_FT_FI3
Number of Residues82
DetailsZN_FING: B box-type 2 => ECO:0000255|PROSITE-ProRule:PRU00024
ChainResidueDetails
AGLU204-LEU245
FGLU204-LEU245

site_idSWS_FT_FI4
Number of Residues16
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00024
ChainResidueDetails
FCYS153
FCYS156
FCYS177
FHIS181
FCYS209
FHIS212
FCYS232
FHIS237
ACYS153
ACYS156
ACYS177
AHIS181
ACYS209
AHIS212
ACYS232
AHIS237

site_idSWS_FT_FI5
Number of Residues4
DetailsMOD_RES: Phosphoserine => ECO:0007744|PubMed:23186163
ChainResidueDetails
ASER138
ASER417
FSER138
FSER417

site_idSWS_FT_FI6
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0000250|UniProtKB:Q62318
ChainResidueDetails
ALYS266
FLYS266

site_idSWS_FT_FI7
Number of Residues4
DetailsMOD_RES: N6-acetyllysine; alternate => ECO:0007744|PubMed:19608861
ChainResidueDetails
FLYS304
FLYS377
ALYS377
ALYS304

site_idSWS_FT_FI8
Number of Residues2
DetailsMOD_RES: N6-acetyllysine => ECO:0007744|PubMed:19608861
ChainResidueDetails
ALYS340
FLYS340

site_idSWS_FT_FI9
Number of Residues6
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS407
FLYS127
FLYS272
FLYS407
ALYS272
ALYS127

site_idSWS_FT_FI10
Number of Residues12
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25218447, ECO:0007744|PubMed:28112733
ChainResidueDetails
FLYS199
FLYS254
FLYS261
FLYS319
FLYS434
ALYS319
ALYS434
DSER302
ALYS199
ALYS254
ALYS261

site_idSWS_FT_FI11
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS304
BLYS335
FLYS304

site_idSWS_FT_FI12
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:25218447
ChainResidueDetails
ALYS366
FLYS366

site_idSWS_FT_FI13
Number of Residues2
DetailsCROSSLNK: Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2); alternate => ECO:0007744|PubMed:25218447, ECO:0007744|PubMed:25755297, ECO:0007744|PubMed:25772364, ECO:0007744|PubMed:28112733
ChainResidueDetails
ALYS377
FLYS377

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon