Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6GZQ

T. thermophilus hibernating 70S ribosome

This is a non-PDB format compatible entry.

Functional Information from GO Data

Chain	GOid	namespace	contents
a1	0003735	molecular_function	structural constituent of ribosome
a1	0005840	cellular_component	ribosome
a1	0006412	biological_process	translation
a1	0015934	cellular_component	large ribosomal subunit
a1	1990904	cellular_component	ribonucleoprotein complex
b1	0003735	molecular_function	structural constituent of ribosome
b1	0005840	cellular_component	ribosome
b1	0006412	biological_process	translation
B2	0003735	molecular_function	structural constituent of ribosome
B2	0005840	cellular_component	ribosome
B2	0006412	biological_process	translation
B2	0015935	cellular_component	small ribosomal subunit
B2	0019843	molecular_function	rRNA binding
B2	1990904	cellular_component	ribonucleoprotein complex
c1	0003735	molecular_function	structural constituent of ribosome
c1	0005840	cellular_component	ribosome
c1	0006412	biological_process	translation
c1	1990904	cellular_component	ribonucleoprotein complex
C1	0003723	molecular_function	RNA binding
C1	0003735	molecular_function	structural constituent of ribosome
C1	0005840	cellular_component	ribosome
C1	0006412	biological_process	translation
C1	0015934	cellular_component	large ribosomal subunit
C1	0016740	molecular_function	transferase activity
C1	0019843	molecular_function	rRNA binding
C1	1990904	cellular_component	ribonucleoprotein complex
C2	0003676	molecular_function	nucleic acid binding
C2	0003723	molecular_function	RNA binding
C2	0003735	molecular_function	structural constituent of ribosome
C2	0006412	biological_process	translation
d1	0003735	molecular_function	structural constituent of ribosome
d1	0005840	cellular_component	ribosome
d1	0006412	biological_process	translation
d1	1990904	cellular_component	ribonucleoprotein complex
D1	0003735	molecular_function	structural constituent of ribosome
D1	0005840	cellular_component	ribosome
D1	0006412	biological_process	translation
D1	0019843	molecular_function	rRNA binding
D1	1990904	cellular_component	ribonucleoprotein complex
D2	0003723	molecular_function	RNA binding
D2	0003735	molecular_function	structural constituent of ribosome
D2	0005840	cellular_component	ribosome
D2	0006412	biological_process	translation
D2	0015935	cellular_component	small ribosomal subunit
D2	0019843	molecular_function	rRNA binding
D2	0046872	molecular_function	metal ion binding
D2	1990904	cellular_component	ribonucleoprotein complex
e1	0003735	molecular_function	structural constituent of ribosome
e1	0005737	cellular_component	cytoplasm
e1	0005840	cellular_component	ribosome
e1	0006412	biological_process	translation
e1	0043229	cellular_component	intracellular organelle
e1	0046872	molecular_function	metal ion binding
e1	1990904	cellular_component	ribonucleoprotein complex
E1	0003735	molecular_function	structural constituent of ribosome
E1	0005840	cellular_component	ribosome
E1	0006412	biological_process	translation
E1	0019843	molecular_function	rRNA binding
E1	1990904	cellular_component	ribonucleoprotein complex
E2	0003723	molecular_function	RNA binding
E2	0003735	molecular_function	structural constituent of ribosome
E2	0005737	cellular_component	cytoplasm
E2	0005840	cellular_component	ribosome
E2	0006412	biological_process	translation
E2	0015935	cellular_component	small ribosomal subunit
E2	0019843	molecular_function	rRNA binding
E2	0043229	cellular_component	intracellular organelle
E2	1990904	cellular_component	ribonucleoprotein complex
F1	0000049	molecular_function	tRNA binding
F1	0003735	molecular_function	structural constituent of ribosome
F1	0005840	cellular_component	ribosome
F1	0006412	biological_process	translation
F1	0019843	molecular_function	rRNA binding
F1	1990904	cellular_component	ribonucleoprotein complex
F2	0003735	molecular_function	structural constituent of ribosome
F2	0005737	cellular_component	cytoplasm
F2	0005840	cellular_component	ribosome
F2	0006412	biological_process	translation
F2	0019843	molecular_function	rRNA binding
F2	0043229	cellular_component	intracellular organelle
F2	1990904	cellular_component	ribonucleoprotein complex
G1	0003735	molecular_function	structural constituent of ribosome
G1	0005840	cellular_component	ribosome
G1	0006412	biological_process	translation
G1	0019843	molecular_function	rRNA binding
G1	1990904	cellular_component	ribonucleoprotein complex
G2	0000049	molecular_function	tRNA binding
G2	0003723	molecular_function	RNA binding
G2	0003735	molecular_function	structural constituent of ribosome
G2	0005840	cellular_component	ribosome
G2	0006412	biological_process	translation
G2	0015935	cellular_component	small ribosomal subunit
G2	0019843	molecular_function	rRNA binding
G2	1990904	cellular_component	ribonucleoprotein complex
H1	0003735	molecular_function	structural constituent of ribosome
H1	0005840	cellular_component	ribosome
H1	0006412	biological_process	translation
H2	0003735	molecular_function	structural constituent of ribosome
H2	0005737	cellular_component	cytoplasm
H2	0005840	cellular_component	ribosome
H2	0006412	biological_process	translation
H2	0019843	molecular_function	rRNA binding
H2	0043229	cellular_component	intracellular organelle
H2	1990904	cellular_component	ribonucleoprotein complex
I1	0003729	molecular_function	mRNA binding
I1	0003735	molecular_function	structural constituent of ribosome
I1	0005737	cellular_component	cytoplasm
I1	0005840	cellular_component	ribosome
I1	0006412	biological_process	translation
I1	0017148	biological_process	negative regulation of translation
I1	0022625	cellular_component	cytosolic large ribosomal subunit
I1	0043229	cellular_component	intracellular organelle
I1	1990904	cellular_component	ribonucleoprotein complex
I2	0000049	molecular_function	tRNA binding
I2	0003735	molecular_function	structural constituent of ribosome
I2	0005840	cellular_component	ribosome
I2	0006412	biological_process	translation
I2	0019843	molecular_function	rRNA binding
I2	0043229	cellular_component	intracellular organelle
I2	1990904	cellular_component	ribonucleoprotein complex
J1	0003735	molecular_function	structural constituent of ribosome
J1	0005840	cellular_component	ribosome
J1	0006412	biological_process	translation
J1	0015934	cellular_component	large ribosomal subunit
J1	0019843	molecular_function	rRNA binding
J1	0022625	cellular_component	cytosolic large ribosomal subunit
J1	0070180	molecular_function	large ribosomal subunit rRNA binding
J1	1990904	cellular_component	ribonucleoprotein complex
J2	0000049	molecular_function	tRNA binding
J2	0003723	molecular_function	RNA binding
J2	0003735	molecular_function	structural constituent of ribosome
J2	0005840	cellular_component	ribosome
J2	0006412	biological_process	translation
J2	0019843	molecular_function	rRNA binding
J2	1990904	cellular_component	ribonucleoprotein complex
K1	0003735	molecular_function	structural constituent of ribosome
K1	0005840	cellular_component	ribosome
K1	0006412	biological_process	translation
K1	0015934	cellular_component	large ribosomal subunit
K1	0019843	molecular_function	rRNA binding
K1	1990904	cellular_component	ribonucleoprotein complex
K2	0003735	molecular_function	structural constituent of ribosome
K2	0005840	cellular_component	ribosome
K2	0006412	biological_process	translation
K2	0019843	molecular_function	rRNA binding
K2	1990904	cellular_component	ribonucleoprotein complex
L1	0000049	molecular_function	tRNA binding
L1	0003735	molecular_function	structural constituent of ribosome
L1	0005840	cellular_component	ribosome
L1	0006412	biological_process	translation
L1	0019843	molecular_function	rRNA binding
L1	0022625	cellular_component	cytosolic large ribosomal subunit
L1	1990904	cellular_component	ribonucleoprotein complex
L2	0000049	molecular_function	tRNA binding
L2	0003735	molecular_function	structural constituent of ribosome
L2	0005840	cellular_component	ribosome
L2	0006412	biological_process	translation
L2	0015935	cellular_component	small ribosomal subunit
L2	0019843	molecular_function	rRNA binding
L2	1990904	cellular_component	ribonucleoprotein complex
M1	0003735	molecular_function	structural constituent of ribosome
M1	0005840	cellular_component	ribosome
M1	0006412	biological_process	translation
M1	1990904	cellular_component	ribonucleoprotein complex
M2	0000049	molecular_function	tRNA binding
M2	0003676	molecular_function	nucleic acid binding
M2	0003723	molecular_function	RNA binding
M2	0003735	molecular_function	structural constituent of ribosome
M2	0005829	cellular_component	cytosol
M2	0005840	cellular_component	ribosome
M2	0006412	biological_process	translation
M2	0015935	cellular_component	small ribosomal subunit
M2	0019843	molecular_function	rRNA binding
M2	1990904	cellular_component	ribonucleoprotein complex
N1	0003735	molecular_function	structural constituent of ribosome
N1	0005737	cellular_component	cytoplasm
N1	0005840	cellular_component	ribosome
N1	0006412	biological_process	translation
N1	0008097	molecular_function	5S rRNA binding
N1	0019843	molecular_function	rRNA binding
N1	0022625	cellular_component	cytosolic large ribosomal subunit
N1	0043229	cellular_component	intracellular organelle
N1	1990904	cellular_component	ribonucleoprotein complex
N2	0003735	molecular_function	structural constituent of ribosome
N2	0005737	cellular_component	cytoplasm
N2	0005840	cellular_component	ribosome
N2	0006412	biological_process	translation
N2	0008270	molecular_function	zinc ion binding
N2	0015935	cellular_component	small ribosomal subunit
N2	0019843	molecular_function	rRNA binding
N2	0043229	cellular_component	intracellular organelle
N2	0046872	molecular_function	metal ion binding
N2	1990904	cellular_component	ribonucleoprotein complex
O1	0003735	molecular_function	structural constituent of ribosome
O1	0005840	cellular_component	ribosome
O1	0006412	biological_process	translation
O1	0019843	molecular_function	rRNA binding
O1	0022625	cellular_component	cytosolic large ribosomal subunit
O1	1990904	cellular_component	ribonucleoprotein complex
O2	0003735	molecular_function	structural constituent of ribosome
O2	0005737	cellular_component	cytoplasm
O2	0005840	cellular_component	ribosome
O2	0006412	biological_process	translation
O2	0019843	molecular_function	rRNA binding
O2	0022627	cellular_component	cytosolic small ribosomal subunit
O2	0043229	cellular_component	intracellular organelle
O2	1990904	cellular_component	ribonucleoprotein complex
P1	0000027	biological_process	ribosomal large subunit assembly
P1	0003735	molecular_function	structural constituent of ribosome
P1	0005840	cellular_component	ribosome
P1	0006412	biological_process	translation
P1	0019843	molecular_function	rRNA binding
P1	0022625	cellular_component	cytosolic large ribosomal subunit
P1	1990904	cellular_component	ribonucleoprotein complex
P2	0003735	molecular_function	structural constituent of ribosome
P2	0005737	cellular_component	cytoplasm
P2	0005840	cellular_component	ribosome
P2	0006412	biological_process	translation
P2	0043229	cellular_component	intracellular organelle
P2	1990904	cellular_component	ribonucleoprotein complex
Q1	0003723	molecular_function	RNA binding
Q1	0003735	molecular_function	structural constituent of ribosome
Q1	0005737	cellular_component	cytoplasm
Q1	0005840	cellular_component	ribosome
Q1	0006412	biological_process	translation
Q1	0019843	molecular_function	rRNA binding
Q1	0043229	cellular_component	intracellular organelle
Q1	1990904	cellular_component	ribonucleoprotein complex
Q2	0003735	molecular_function	structural constituent of ribosome
Q2	0005840	cellular_component	ribosome
Q2	0006412	biological_process	translation
Q2	0019843	molecular_function	rRNA binding
Q2	0022627	cellular_component	cytosolic small ribosomal subunit
Q2	1990904	cellular_component	ribonucleoprotein complex
R1	0003735	molecular_function	structural constituent of ribosome
R1	0005840	cellular_component	ribosome
R1	0006412	biological_process	translation
R1	0015934	cellular_component	large ribosomal subunit
R1	0019843	molecular_function	rRNA binding
R1	1990904	cellular_component	ribonucleoprotein complex
R2	0003735	molecular_function	structural constituent of ribosome
R2	0005840	cellular_component	ribosome
R2	0006412	biological_process	translation
S1	0000027	biological_process	ribosomal large subunit assembly
S1	0003735	molecular_function	structural constituent of ribosome
S1	0005840	cellular_component	ribosome
S1	0006412	biological_process	translation
S1	0019843	molecular_function	rRNA binding
S1	0022625	cellular_component	cytosolic large ribosomal subunit
S1	1990904	cellular_component	ribonucleoprotein complex
S2	0003723	molecular_function	RNA binding
S2	0003735	molecular_function	structural constituent of ribosome
S2	0005840	cellular_component	ribosome
S2	0006412	biological_process	translation
S2	0015935	cellular_component	small ribosomal subunit
T1	0003723	molecular_function	RNA binding
T1	0003735	molecular_function	structural constituent of ribosome
T1	0005840	cellular_component	ribosome
T1	0006412	biological_process	translation
T1	0019843	molecular_function	rRNA binding
T1	1990904	cellular_component	ribonucleoprotein complex
T2	0003723	molecular_function	RNA binding
T2	0003735	molecular_function	structural constituent of ribosome
T2	0005840	cellular_component	ribosome
T2	0006412	biological_process	translation
T2	0019843	molecular_function	rRNA binding
T2	1990904	cellular_component	ribonucleoprotein complex
U1	0003735	molecular_function	structural constituent of ribosome
U1	0005840	cellular_component	ribosome
U1	0006412	biological_process	translation
U1	0008097	molecular_function	5S rRNA binding
U2	0005840	cellular_component	ribosome
U2	0019843	molecular_function	rRNA binding
U2	1990904	cellular_component	ribonucleoprotein complex
V1	0003735	molecular_function	structural constituent of ribosome
V1	0005840	cellular_component	ribosome
V1	0006412	biological_process	translation
V1	0022625	cellular_component	cytosolic large ribosomal subunit
V1	1990904	cellular_component	ribonucleoprotein complex
V2	0044238	biological_process	primary metabolic process
W1	0003735	molecular_function	structural constituent of ribosome
W1	0005840	cellular_component	ribosome
W1	0006412	biological_process	translation
W1	1990904	cellular_component	ribonucleoprotein complex
X1	0003735	molecular_function	structural constituent of ribosome
X1	0005840	cellular_component	ribosome
X1	0006412	biological_process	translation
X1	0022625	cellular_component	cytosolic large ribosomal subunit
X1	1990904	cellular_component	ribonucleoprotein complex
Y1	0003735	molecular_function	structural constituent of ribosome
Y1	0005840	cellular_component	ribosome
Y1	0006412	biological_process	translation
Y1	0015934	cellular_component	large ribosomal subunit
Y1	0022625	cellular_component	cytosolic large ribosomal subunit
Y1	1990904	cellular_component	ribonucleoprotein complex
Z1	0003735	molecular_function	structural constituent of ribosome
Z1	0005840	cellular_component	ribosome
Z1	0006412	biological_process	translation

Functional Information from PROSITE/UniProt

site_id	PS00049
Number of Residues	27
Details	RIBOSOMAL_L14 Ribosomal protein L14 signature. AVVVrtkkeikrp.DGsairFddNaaVI

Chain	Residue	Details
J1	ALA60-ILE86

site_id	PS00052
Number of Residues	27
Details	RIBOSOMAL_S7 Ribosomal protein S7 signature. DvLvtaFInkimrdGKKnlaarIFydA

Chain	Residue	Details
G2	ASP20-ALA46

site_id	PS00053
Number of Residues	18
Details	RIBOSOMAL_S8 Ribosomal protein S8 signature. GiaILSTSkGVLtdreAR

Chain	Residue	Details
H2	GLY108-ARG125

site_id	PS00054
Number of Residues	23
Details	RIBOSOMAL_S11 Ribosomal protein S11 signature. IrALqaS.GLqVksivDdTPvPHN

Chain	Residue	Details
K2	ILE95-ASN117

site_id	PS00055
Number of Residues	8
Details	RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR

Chain	Residue	Details
L2	LYS46-ARG53

site_id	PS00056
Number of Residues	13
Details	RIBOSOMAL_S17 Ribosomal protein S17 signature. GDvVeIiEsRPIS

Chain	Residue	Details
Q2	GLY54-SER66

site_id	PS00057
Number of Residues	24
Details	RIBOSOMAL_S18 Ribosomal protein S18 signature. RDYrn.VevLkrFLSEt.GKIlprRR

Chain	Residue	Details
R2	ARG32-ARG55

site_id	PS00063
Number of Residues	16
Details	ALDOKETO_REDUCTASE_3 Aldo/keto reductase family putative active site signature. LAKTIKraRIlGLlPF

Chain	Residue	Details
R2	LEU66-PHE81

site_id	PS00196
Number of Residues	16
Details	COPPER_BLUE Type-1 copper (blue) proteins signature. GrvY.VICenPkHkqr.Q

Chain	Residue	Details
e1	GLY21-GLN36

site_id	PS00323
Number of Residues	25
Details	RIBOSOMAL_S19 Ribosomal protein S19 signature. NGKqhvpvyItenmVGhkLGEFapT

Chain	Residue	Details
S2	ASN53-THR77

site_id	PS00358
Number of Residues	17
Details	RIBOSOMAL_L5 Ribosomal protein L5 signature. LalITGQkpAvTrAKkS

Chain	Residue	Details
F1	LEU60-SER76

site_id	PS00360
Number of Residues	19
Details	RIBOSOMAL_S9 Ribosomal protein S9 signature. GGGksGQidAiklGiARAL

Chain	Residue	Details
I2	GLY67-LEU85

site_id	PS00361
Number of Residues	16
Details	RIBOSOMAL_S10 Ribosomal protein S10 signature. ArrsGAqvsGPIpLPT

Chain	Residue	Details
J2	ALA27-THR42

site_id	PS00362
Number of Residues	31
Details	RIBOSOMAL_S15 Ribosomal protein S15 signature. LseHLkvhKkDhhShrgLlmMvgqrrrLlrY

Chain	Residue	Details
O2	LEU39-TYR69

site_id	PS00464
Number of Residues	25
Details	RIBOSOMAL_L22 Ribosomal protein L22 signature. KrvLpRArGRadiikkrtSHITViL

Chain	Residue	Details
R1	LYS83-LEU107

site_id	PS00467
Number of Residues	12
Details	RIBOSOMAL_L2 Ribosomal protein L2 signature. PhvRGAAmNPvD

Chain	Residue	Details
C1	PRO219-ASP230

site_id	PS00474
Number of Residues	24
Details	RIBOSOMAL_L3 Ribosomal protein L3 signature. FkpgervDvtGtSkGRGfaGvmkR

Chain	Residue	Details
D1	PHE96-ARG119

site_id	PS00475
Number of Residues	30
Details	RIBOSOMAL_L15 Ribosomal protein L15 signature. KILGeGeAkp...LkVvahaFSksAlekLkaaG

Chain	Residue	Details
K1	LYS113-GLY142

site_id	PS00527
Number of Residues	23
Details	RIBOSOMAL_S14 Ribosomal protein S14 signature. R.CvrcgrarsvyrfFGLCRiCLR

Chain	Residue	Details
N2	ARG23-ARG45

site_id	PS00548
Number of Residues	35
Details	RIBOSOMAL_S3 Ribosomal protein S3 signature. ARtewaaqGrVplHt..LranIDygfalarTtyGvlG

Chain	Residue	Details
C2	ALA163-GLY197

site_id	PS00579
Number of Residues	15
Details	RIBOSOMAL_L29 Ribosomal protein L29 signature. QNHKIRdLKRQIARL

Chain	Residue	Details
X1	GLN46-LEU60

site_id	PS00582
Number of Residues	20
Details	RIBOSOMAL_L33 Ribosomal protein L33 signature. YaTeKNkrntPnkLElrKYC

Chain	Residue	Details
b1	TYR21-CYS40

site_id	PS00585
Number of Residues	33
Details	RIBOSOMAL_S5 Ribosomal protein S5 signature. GRrfrFgAlvVVGDrq.GrVGlGfgkap.EVpl.AV

Chain	Residue	Details
E2	GLY23-VAL55

site_id	PS00632
Number of Residues	25
Details	RIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRlgfAvSrrqARqLV

Chain	Residue	Details
D2	LEU97-VAL121

site_id	PS00634
Number of Residues	33
Details	RIBOSOMAL_L30 Ribosomal protein L30 signature. ALkaLgLrRlqQeRvledtpairgNVekVahLV

Chain	Residue	Details
Y1	ALA22-VAL54

site_id	PS00646
Number of Residues	14
Details	RIBOSOMAL_S13_1 Ribosomal protein S13 signature. RGlRHrrGlpVRGQ

Chain	Residue	Details
M2	ARG88-GLN101

site_id	PS00651
Number of Residues	28
Details	RIBOSOMAL_L9 Ribosomal protein L9 signature. GdvGqvvdVkpGYarNYLlprglAvlaT

Chain	Residue	Details
H1	GLY13-THR40

site_id	PS00783
Number of Residues	23
Details	RIBOSOMAL_L13 Ribosomal protein L13 signature. VKGMLPkgpl.GRrlfkrLkVYaG

Chain	Residue	Details
I1	VAL103-GLY125

site_id	PS00784
Number of Residues	20
Details	RIBOSOMAL_L34 Ribosomal protein L34 signature. KRTWQpnrrkRakth.GFraR

Chain	Residue	Details
c1	LYS2-ARG21

site_id	PS00828
Number of Residues	26
Details	RIBOSOMAL_L36 Ribosomal protein L36 signature. CdkCkvIrRhgrVyViCenp.KHkQrQ

Chain	Residue	Details
e1	CYS11-GLN36

site_id	PS00831
Number of Residues	15
Details	RIBOSOMAL_L27 Ribosomal protein L27 signature. GnILvRQRGtrfkpG

Chain	Residue	Details
V1	GLY34-GLY48

site_id	PS00936
Number of Residues	27
Details	RIBOSOMAL_L35 Ribosomal protein L35 signature. KTHkGAkKRVkitasgkvvamktgk.RH

Chain	Residue	Details
d1	LYS5-HIS31

site_id	PS00937
Number of Residues	17
Details	RIBOSOMAL_L20 Ribosomal protein L20 signature. KrdfRrLWIVRINaacR

Chain	Residue	Details
P1	LYS54-ARG70

site_id	PS00962
Number of Residues	12
Details	RIBOSOMAL_S2_1 Ribosomal protein S2 signature 1. VkELLEAGVHFG

Chain	Residue	Details
B2	VAL7-GLY18

site_id	PS01015
Number of Residues	16
Details	RIBOSOMAL_L19 Ribosomal protein L19 signature. IvQrGRAR.RAKLYFIR

Chain	Residue	Details
O1	ILE88-ARG103

site_id	PS01048
Number of Residues	10
Details	RIBOSOMAL_S6 Ribosomal protein S6 signature. GlRRLAYpIA

Chain	Residue	Details
F2	GLY44-ALA53

site_id	PS01108
Number of Residues	18
Details	RIBOSOMAL_L24 Ribosomal protein L24 signature. GDtVlVAsGkyKGrv.GkV

Chain	Residue	Details
T1	GLY10-VAL27

site_id	PS01143
Number of Residues	22
Details	RIBOSOMAL_L31 Ribosomal protein L31 signature. EVcskcHPFYTgqqrfvdte....GR

Chain	Residue	Details
Z1	GLU34-ARG55

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	4
Details	BINDING: BINDING => ECO:0000269\|PubMed:11866529

Chain	Residue	Details
N2	CYS24
N2	CYS27
N2	CYS40
N2	CYS43

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		Validation report (PDF)