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6GS7

Crystal structure of peptide transporter DtpA-nanobody in glycine buffer

Functional Information from GO Data
ChainGOidnamespacecontents
A0005886cellular_componentplasma membrane
A0006857biological_processoligopeptide transport
A0015031biological_processprotein transport
A0015333molecular_functionpeptide:proton symporter activity
A0015833biological_processpeptide transport
A0016020cellular_componentmembrane
A0022857molecular_functiontransmembrane transporter activity
A0035442biological_processdipeptide transmembrane transport
A0035443biological_processtripeptide transmembrane transport
A0042937molecular_functiontripeptide transmembrane transporter activity
A0042938biological_processdipeptide transport
A0042939biological_processtripeptide transport
A0055085biological_processtransmembrane transport
A0071916molecular_functiondipeptide transmembrane transporter activity
A1902600biological_processproton transmembrane transport
A1904680molecular_functionpeptide transmembrane transporter activity
Functional Information from PROSITE/UniProt
site_idPS00778
Number of Residues17
DetailsHIS_ACID_PHOSPHAT_2 Histidine acid phosphatases active site signature. LvAWsGHDAGIvyMgmA
ChainResidueDetails
ALEU104-ALA120

site_idPS01022
Number of Residues25
DetailsPTR2_1 PTR2 family proton/oligopeptide symporters signature 1. GGWLGDkVLGtkrVImlgAiVlaiG
ChainResidueDetails
AGLY77-GLY101

site_idPS01023
Number of Residues13
DetailsPTR2_2 PTR2 family proton/oligopeptide symporters signature 2. FtmYYMsVNIGSF
ChainResidueDetails
APHE152-PHE164

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues282
DetailsTRANSMEM: Helical => ECO:0000255
ChainResidueDetails
AALA22-MET44
ATYR321-ASN341
APHE353-PHE373
AILE379-ILE399
ALEU415-GLY435
AVAL460-PRO480
AILE60-LEU80
AVAL90-HIS110
AALA112-ASN132
AMET154-ALA174
ATRP179-PHE199
AASN220-HIS240
AMET247-MET267
AMET275-MET295

site_idSWS_FT_FI2
Number of Residues74
DetailsTOPO_DOM: Periplasmic => ECO:0000255
ChainResidueDetails
AALA45-SER59
AASP111
AALA175-GLY178
AASN241-ARG246
APRO296-GLN320
AALA374-GLY378
ATYR436-ARG459

site_idSWS_FT_FI3
Number of Residues96
DetailsTOPO_DOM: Cytoplasmic => ECO:0000255
ChainResidueDetails
AGLY81-ARG89
APRO133-THR153
ACYS200-ARG219
ALYS268-LYS274
ALYS342-LYS352
ASER400-ARG414
ALYS481-ALA500

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PDB entries from 2024-10-30

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