Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6GRR

Crystal structure of Escherichia coli amine oxidase mutant I342F/E573Q

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005507	molecular_function	copper ion binding
A	0005509	molecular_function	calcium ion binding
A	0006559	biological_process	L-phenylalanine catabolic process
A	0008131	molecular_function	primary methylamine oxidase activity
A	0009308	biological_process	amine metabolic process
A	0016491	molecular_function	oxidoreductase activity
A	0016641	molecular_function	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
A	0019607	biological_process	phenylethylamine catabolic process
A	0042597	cellular_component	periplasmic space
A	0046872	molecular_function	metal ion binding
A	0048038	molecular_function	quinone binding
B	0005507	molecular_function	copper ion binding
B	0005509	molecular_function	calcium ion binding
B	0006559	biological_process	L-phenylalanine catabolic process
B	0008131	molecular_function	primary methylamine oxidase activity
B	0009308	biological_process	amine metabolic process
B	0016491	molecular_function	oxidoreductase activity
B	0016641	molecular_function	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
B	0019607	biological_process	phenylethylamine catabolic process
B	0042597	cellular_component	periplasmic space
B	0046872	molecular_function	metal ion binding
B	0048038	molecular_function	quinone binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue CU A 801

Chain	Residue
A	TYR466
A	HIS524
A	HIS526
A	HIS689

site_id	AC2
Number of Residues	6
Details	binding site for residue CA A 802

Chain	Residue
A	HOH994
A	ASP533
A	LEU534
A	ASP535
A	ASP678
A	ALA679

site_id	AC3
Number of Residues	8
Details	binding site for residue GOL A 803

Chain	Residue
A	LYS160
A	HIS161
A	ALA183
A	HIS184
A	ASP239
A	HOH972
A	HOH1001
A	HOH1180

site_id	AC4
Number of Residues	9
Details	binding site for residue GOL A 804

Chain	Residue
A	GLU451
A	ARG453
A	HOH1273
B	MET306
B	GLN307
B	ILE308
B	GLY399
B	PRO403
B	SER404

site_id	AC5
Number of Residues	8
Details	binding site for residue GOL A 805

Chain	Residue
A	ARG452
A	HIS475
A	ASN477
A	THR479
B	THR612
B	ARG692
B	GLU702
B	HOH922

site_id	AC6
Number of Residues	8
Details	binding site for residue GOL A 806

Chain	Residue
A	ARG432
A	ASP471
A	ILE473
A	ASP483
A	TRP703
A	HOH907
A	HOH1144
A	HOH1328

site_id	AC7
Number of Residues	10
Details	binding site for residue GOL A 807

Chain	Residue
A	THR509
A	ARG510
A	GLY512
A	THR513
A	VAL690
A	HOH1007
A	HOH1172
B	MET546
B	VAL565
B	GOL804

site_id	AC8
Number of Residues	7
Details	binding site for residue GOL A 808

Chain	Residue
A	GLN567
A	ASN599
A	PRO600
A	TRP711
A	ASN712
A	HOH1176
A	HOH1245

site_id	AC9
Number of Residues	4
Details	binding site for residue CU B 801

Chain	Residue
B	TYR466
B	HIS524
B	HIS526
B	HIS689

site_id	AD1
Number of Residues	6
Details	binding site for residue CA B 802

Chain	Residue
B	ASP533
B	LEU534
B	ASP535
B	ASP678
B	ALA679
B	HOH1045

site_id	AD2
Number of Residues	8
Details	binding site for residue GOL B 803

Chain	Residue
A	MET306
A	GLN307
A	GLY399
A	PRO403
A	SER404
B	GLU451
B	ARG453
B	HOH1158

site_id	AD3
Number of Residues	8
Details	binding site for residue GOL B 804

Chain	Residue
A	GOL807
B	GLN567
B	ASN599
B	PRO600
B	TRP711
B	ASN712
B	HOH1025
B	HOH1120

site_id	AD4
Number of Residues	2
Details	binding site for residue GOL B 805

Chain	Residue
B	ASP624
B	HIS629

site_id	AD5
Number of Residues	8
Details	binding site for residue GOL B 806

Chain	Residue
A	THR612
A	GLU702
B	ARG452
B	HIS475
B	ASN477
B	THR479
B	HOH908
B	HOH911

site_id	AD6
Number of Residues	8
Details	binding site for residue GOL B 807

Chain	Residue
B	ASP483
B	TRP703
B	HOH902
B	HOH1096
B	HOH1198
B	ARG432
B	ASP471
B	ILE473

Functional Information from PROSITE/UniProt

site_id	PS01164
Number of Residues	14
Details	COPPER_AMINE_OXID_1 Copper amine oxidase topaquinone signature. LVVrwisTvgNYDY

Chain	Residue	Details
A	LEU455-TYR468
B	LEU455-TYR468

site_id	PS01165
Number of Residues	14
Details	COPPER_AMINE_OXID_2 Copper amine oxidase copper-binding site signature. TtGttHVaraEEwP

Chain	Residue	Details
A	THR684-PRO697
B	THR684-PRO697

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	42
Details	Region: {"description":"Disordered","evidences":[{"source":"SAM","id":"MobiDB-lite","evidenceCode":"ECO:0000256"}]}

Chain

Residue

Details

site_id	SWS_FT_FI2
Number of Residues	2
Details	Active site: {"description":"Proton acceptor","evidences":[{"source":"PubMed","id":"10387067","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9048544","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1OAC","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI3
Number of Residues	2
Details	Active site: {"description":"Schiff-base intermediate with substrate; via topaquinone","evidences":[{"source":"PubMed","id":"10387067","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1OAC","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WGQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WO0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WOF","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI4
Number of Residues	22
Details	Binding site: {"evidences":[{"source":"PubMed","id":"10576737","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1D6U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1D6Y","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1D6Z","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI5
Number of Residues	10
Details	Binding site: {"evidences":[{"source":"PubMed","id":"10576737","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9048544","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1D6U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1D6Y","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1D6Z","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LVN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1SPU","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI6
Number of Residues	6
Details	Binding site: {"evidences":[{"source":"PubMed","id":"10387067","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"10576737","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9048544","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1D6U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1D6Y","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1D6Z","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1DYU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1JRQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LVN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1OAC","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1SPU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2W0Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WGQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WO0","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WOF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WOH","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI7
Number of Residues	6
Details	Binding site: {"evidences":[{"source":"UniProtKB","id":"Q43077","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

site_id	SWS_FT_FI8
Number of Residues	2
Details	Binding site: {"evidences":[{"source":"PubMed","id":"10387067","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"10576737","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9048544","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1D6U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1D6Y","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1D6Z","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1DYU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1JRQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LVN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1OAC","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1SPU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2W0Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WGQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WOH","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI9
Number of Residues	6
Details	Binding site: {"evidences":[{"source":"PubMed","id":"10387067","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"10576737","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"9048544","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1D6U","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1D6Y","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1D6Z","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1DYU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1JRQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1LVN","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1OAC","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1SPU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2W0Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WGQ","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI10
Number of Residues	2
Details	Binding site: {"evidences":[{"source":"PubMed","id":"10576737","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1D6Y","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1D6Z","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1DYU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1OAC","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAL","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2WGQ","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

site_id	SWS_FT_FI11
Number of Residues	2
Details	Binding site: {}

Chain

Residue

Details

site_id	SWS_FT_FI12
Number of Residues	2
Details	Modified residue: {"description":"2',4',5'-topaquinone","evidences":[{"source":"PubMed","id":"10387067","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1DYU","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1JRQ","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAF","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAK","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1QAL","evidenceCode":"ECO:0007744"}]}

Chain

Residue

Details

Catalytic Information from CSA

site_id	MCSA1
Number of Residues	6
Details	M-CSA 864

Chain	Residue	Details
B	TYR369	electrostatic stabiliser
B	ASP383	proton shuttle (general acid/base)
B	TYR466	covalent catalysis
B	HIS524	metal ligand
B	HIS526	metal ligand
B	HIS689	metal ligand

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)