6GLM
Crystal structure of hMTH1 N33A in complex with LW14 in the absence of acetate
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003723 | molecular_function | RNA binding |
A | 0005515 | molecular_function | protein binding |
A | 0005634 | cellular_component | nucleus |
A | 0005737 | cellular_component | cytoplasm |
A | 0005739 | cellular_component | mitochondrion |
A | 0005759 | cellular_component | mitochondrial matrix |
A | 0005829 | cellular_component | cytosol |
A | 0006152 | biological_process | purine nucleoside catabolic process |
A | 0006281 | biological_process | DNA repair |
A | 0006979 | biological_process | response to oxidative stress |
A | 0008413 | molecular_function | 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity |
A | 0008828 | molecular_function | dATP diphosphatase activity |
A | 0016787 | molecular_function | hydrolase activity |
A | 0016818 | molecular_function | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides |
A | 0030515 | molecular_function | snoRNA binding |
A | 0035539 | molecular_function | 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity |
A | 0042262 | biological_process | DNA protection |
A | 0046872 | molecular_function | metal ion binding |
A | 0047693 | molecular_function | ATP diphosphatase activity |
A | 0106377 | molecular_function | 2-hydroxy-ATP hydrolase activity |
A | 0106378 | molecular_function | 2-hydroxy-dATP hydrolase activity |
A | 0106431 | molecular_function | N6-methyl-(d)ATP hydrolase activity |
A | 0106433 | molecular_function | O6-methyl-dGTP hydrolase activity |
A | 0140933 | molecular_function | 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 10 |
Details | binding site for residue BU8 A 201 |
Chain | Residue |
A | PHE27 |
A | HOH390 |
A | PHE72 |
A | PHE74 |
A | MET81 |
A | TRP117 |
A | ASP119 |
A | ASP120 |
A | HOH304 |
A | HOH341 |
site_id | AC2 |
Number of Residues | 4 |
Details | binding site for residue SO4 A 202 |
Chain | Residue |
A | HIS65 |
A | LYS66 |
A | HOH313 |
A | HOH352 |
site_id | AC3 |
Number of Residues | 8 |
Details | binding site for residue SO4 A 203 |
Chain | Residue |
A | LYS138 |
A | LYS138 |
A | LEU146 |
A | LEU146 |
A | ASP147 |
A | ASP147 |
A | HOH306 |
A | HOH306 |
Functional Information from PROSITE/UniProt
site_id | PS00893 |
Number of Residues | 22 |
Details | NUDIX_BOX Nudix box signature. GkvqegEtiedGArRELqEEsG |
Chain | Residue | Details |
A | GLY37-GLY58 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 129 |
Details | Domain: {"description":"Nudix hydrolase","evidences":[{"source":"PROSITE-ProRule","id":"PRU00794","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI2 |
Number of Residues | 21 |
Details | Motif: {"description":"Nudix box","evidences":[{"source":"PROSITE-ProRule","id":"PRU00794","evidenceCode":"ECO:0000255"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI3 |
Number of Residues | 6 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"30304478","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5OTM","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI4 |
Number of Residues | 1 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"26999531","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5FSK","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI5 |
Number of Residues | 3 |
Details | Binding site: {"evidences":[{"source":"PubMed","id":"26999531","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"28035004","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"5FSI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GHI","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"5GHM","evidenceCode":"ECO:0007744"}]} |
Chain | Residue | Details |
site_id | SWS_FT_FI6 |
Number of Residues | 5 |
Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"Q7ZWC3","evidenceCode":"ECO:0000250"}]} |
Chain | Residue | Details |