6GDA

Cytochrome c in complex with Sulfonato-calix[8]arene, P43212 form soaked with Spermine

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0005515	molecular_function	protein binding
A	0005739	cellular_component	mitochondrion
A	0005758	cellular_component	mitochondrial intermembrane space
A	0006122	biological_process	mitochondrial electron transport, ubiquinol to cytochrome c
A	0006123	biological_process	mitochondrial electron transport, cytochrome c to oxygen
A	0009055	molecular_function	electron transfer activity
A	0020037	molecular_function	heme binding
A	0046872	molecular_function	metal ion binding
A	0070469	cellular_component	respirasome
A	1901612	molecular_function	cardiolipin binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	21
Details	binding site for residue HEC A 201

Chain	Residue
A	ARG13
A	TYR48
A	THR49
A	ASN52
A	TRP59
A	MET64
A	TYR67
A	LEU68
A	THR78
A	LYS79
A	MET80
A	CYS14
A	PHE82
A	HOH303
A	CYS17
A	HIS18
A	GLY29
A	ILE35
A	SER40
A	GLY41
A	TYR46

---

site_id	AC2
Number of Residues	17
Details	binding site for residue EVB A 202

Chain	Residue
A	LYS11
A	THR12
A	LEU15
A	GLN16
A	THR19
A	GLU21
A	PRO25
A	HIS26
A	LYS27
A	HIS39
A	GLY41
A	GLN42
A	TYR46
A	TYR48
A	ILE53
A	LYS54
A	ASN56

---

site_id	AC3
Number of Residues	12
Details	binding site for residue EVB A 203

Chain	Residue
A	ALA-1
A	ALA3
A	LYS4
A	LYS4
A	LYS5
A	ALA7
A	THR8
A	THR96
A	TYR97
A	LYS100
A	SPM214
A	SPM215

---

site_id	AC4
Number of Residues	10
Details	binding site for residue EVB A 204

Chain	Residue
A	ARG13
A	ASN70
A	LYS72
A	LYS73
A	PRO76
A	PHE82
A	GLY83
A	GLY84
A	LEU85
A	LYS86

---

site_id	AC5
Number of Residues	3
Details	binding site for residue SO4 A 205

Chain	Residue
A	THR49
A	ASP50
A	HOH304

---

site_id	AC6
Number of Residues	2
Details	binding site for residue SO4 A 206

Chain	Residue
A	LYS22
A	HIS33

---

site_id	AC7
Number of Residues	1
Details	binding site for residue SO4 A 207

Chain	Residue
A	ARG38

---

site_id	AC8
Number of Residues	2
Details	binding site for residue SO4 A 208

Chain	Residue
A	GLU44
A	GLY45

---

site_id	AC9
Number of Residues	4
Details	binding site for residue SO4 A 209

Chain	Residue
A	LYS86
A	LYS87
A	GLU88
A	SO4211

---

site_id	AD1
Number of Residues	1
Details	binding site for residue SO4 A 210

Chain	Residue
A	LYS55

---

site_id	AD2
Number of Residues	5
Details	binding site for residue SO4 A 211

Chain	Residue
A	GLU-4
A	ALA-5
A	GLU88
A	ARG91
A	SO4209

---

site_id	AD3
Number of Residues	1
Details	binding site for residue SO4 A 212

Chain	Residue
A	SPM214

---

site_id	AD4
Number of Residues	1
Details	binding site for residue SO4 A 213

Chain	Residue
A	SPM215

---

site_id	AD5
Number of Residues	2
Details	binding site for residue SPM A 214

Chain	Residue
A	EVB203
A	SO4212

---

site_id	AD6
Number of Residues	2
Details	binding site for residue SPM A 215

Chain	Residue
A	EVB203
A	SO4213

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	2
Details	BINDING: covalent => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5

Chain	Residue	Details
A	CYS17
A	CYS14

---

site_id	SWS_FT_FI2
Number of Residues	2
Details	BINDING: axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5

Chain	Residue	Details
A	MET80
A	HIS18

---

site_id	SWS_FT_FI3
Number of Residues	1
Details	MOD_RES: N6,N6,N6-trimethyllysine; by CTM1 => ECO:0000269|PubMed:10791961, ECO:0000269|PubMed:11880631, ECO:0007744|PDB:1KYO

Chain	Residue	Details
A	LYS72

---

site_id	SWS_FT_FI4
Number of Residues	1
Details	MOD_RES: N6,N6,N6-trimethyllysine => ECO:0000269|PubMed:10821864, ECO:0000269|PubMed:18390544

Chain	Residue	Details
A	LYS73

---