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6GD6

Cytochrome c in complex with Sulfonato-calix[8]arene, H3 form with ammonium sulfate

Functional Information from GO Data
ChainGOidnamespacecontents
A0005515molecular_functionprotein binding
A0005739cellular_componentmitochondrion
A0005758cellular_componentmitochondrial intermembrane space
A0006122biological_processmitochondrial electron transport, ubiquinol to cytochrome c
A0006123biological_processmitochondrial electron transport, cytochrome c to oxygen
A0009055molecular_functionelectron transfer activity
A0020037molecular_functionheme binding
A0046872molecular_functionmetal ion binding
A1901612molecular_functioncardiolipin binding
Functional Information from PDB Data
site_idAC1
Number of Residues22
Detailsbinding site for residue HEC A 201
ChainResidue
AARG13
ATYR46
ATYR48
ATHR49
AASN52
ATRP59
AMET64
ATYR67
ATHR78
ALYS79
AMET80
ACYS14
ALEU85
ALEU94
AHOH347
ACYS17
AHIS18
AVAL28
APRO30
AILE35
ASER40
AGLY41

site_idAC2
Number of Residues51
Detailsbinding site for residue EVB A 202
ChainResidue
AALA-1
ASER2
AALA3
ALYS4
AALA7
AARG13
AASN70
ALYS72
ALYS73
APHE82
AGLY83
AGLY84
ALYS86
ALYS87
ATHR96
ALYS100
AHOH314
AHOH322
AHOH327
AHOH346
AHOH350
AHOH354
AHOH361
AHOH368
AHOH373
AHOH381
AHOH395
AHOH403
AHOH405
AHOH425
AHOH431
AHOH437
AHOH439
AHOH448
AHOH456
AHOH463
AHOH470
AHOH474
AHOH475
AHOH482
AHOH488
AHOH503
AHOH516
AHOH525
AHOH534
AHOH567
AHOH569
AHOH570
AHOH575
AHOH581
AHOH582

site_idAC3
Number of Residues6
Detailsbinding site for residue SO4 A 203
ChainResidue
AARG38
AHIS39
AGLN42
AHOH305
AHOH309
AHOH334

site_idAC4
Number of Residues7
Detailsbinding site for residue SO4 A 204
ChainResidue
ALYS86
ALYS87
AGLU88
AHOH331
AHOH333
AHOH352
AHOH372

site_idAC5
Number of Residues6
Detailsbinding site for residue SO4 A 205
ChainResidue
ALYS22
AHIS33
AARG38
AHOH330
AHOH344
AHOH365

site_idAC6
Number of Residues4
Detailsbinding site for residue SO4 A 206
ChainResidue
ALYS99
AHOH369
AHOH384
AHOH462

site_idAC7
Number of Residues5
Detailsbinding site for residue SO4 A 207
ChainResidue
AHOH422
AHOH457
ALYS55
AHOH306
AHOH317

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsBINDING: covalent => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
ChainResidueDetails
ACYS14
ACYS17

site_idSWS_FT_FI2
Number of Residues2
DetailsBINDING: axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
ChainResidueDetails
AHIS18
AMET80

site_idSWS_FT_FI3
Number of Residues1
DetailsMOD_RES: N6,N6,N6-trimethyllysine; by CTM1 => ECO:0000269|PubMed:10791961, ECO:0000269|PubMed:11880631, ECO:0007744|PDB:1KYO
ChainResidueDetails
ALYS72

site_idSWS_FT_FI4
Number of Residues1
DetailsMOD_RES: N6,N6,N6-trimethyllysine => ECO:0000269|PubMed:10821864, ECO:0000269|PubMed:18390544
ChainResidueDetails
ALYS73

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PDB entries from 2024-10-30

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