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6GBJ

Repertoires of functionally diverse enzymes through computational design at epistatic active-site positions

Functional Information from GO Data
ChainGOidnamespacecontents
A0004063molecular_functionaryldialkylphosphatase activity
A0005886cellular_componentplasma membrane
A0008270molecular_functionzinc ion binding
A0009056biological_processcatabolic process
A0016787molecular_functionhydrolase activity
A0016788molecular_functionhydrolase activity, acting on ester bonds
A0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue FMT A 401
ChainResidue
AHIS55
AHOH530
AHIS57
ATRP131
ALYS169
AHIS201
AHIS230
AZN402
AZN403
AEDO405

site_idAC2
Number of Residues7
Detailsbinding site for residue ZN A 402
ChainResidue
AHIS55
AHIS57
AASP301
AFMT401
AZN403
AEDO405
AHOH530

site_idAC3
Number of Residues8
Detailsbinding site for residue ZN A 403
ChainResidue
AHIS201
AHIS230
AARG254
AFMT401
AZN402
AEDO405
AHOH502
AHOH530

site_idAC4
Number of Residues8
Detailsbinding site for residue EDO A 404
ChainResidue
AHIS57
AGLY60
ATRP257
AASP301
ATHR303
APHE306
AEDO405
AHOH526

site_idAC5
Number of Residues10
Detailsbinding site for residue EDO A 405
ChainResidue
AHIS57
ATRP131
AFMT401
AZN402
AZN403
AEDO404
AEDO407
AHOH502
AHOH526
AHOH530

site_idAC6
Number of Residues7
Detailsbinding site for residue EDO A 406
ChainResidue
ATYR156
AGLY157
AILE158
AGLU159
AASP160
ATHR161
AGLY162

site_idAC7
Number of Residues7
Detailsbinding site for residue EDO A 407
ChainResidue
ATRP131
AHIS201
AARG254
AEDO405
AHOH502
AHOH503
AHOH529

site_idAC8
Number of Residues8
Detailsbinding site for residue EDO A 408
ChainResidue
APRO70
ASER75
AARG76
AASP77
AARG363
AHOH506
AHOH680
AHOH701

site_idAC9
Number of Residues7
Detailsbinding site for residue EDO A 409
ChainResidue
AASP233
AARG254
ALEU271
ALEU272
AARG280
AHOH598
AHOH608

site_idAD1
Number of Residues4
Detailsbinding site for residue EDO A 410
ChainResidue
ALYS175
AALA176
AGLU181
AGLN211

site_idAD2
Number of Residues7
Detailsbinding site for residue EDO A 411
ChainResidue
APRO256
ATRP277
AVAL320
AASN321
APHE327
AHOH578
AHOH584

site_idAD3
Number of Residues4
Detailsbinding site for residue SO4 A 412
ChainResidue
ALYS82
AARG85
AARG89
AHOH537

site_idAD4
Number of Residues2
Detailsbinding site for residue SO4 A 413
ChainResidue
ATRP277
AGLN278

site_idAD5
Number of Residues3
Detailsbinding site for residue SO4 A 414
ChainResidue
AARG139
AHOH549
AHOH582

Functional Information from PROSITE/UniProt
site_idPS01322
Number of Residues9
DetailsPHOSPHOTRIESTERASE_1 Phosphotriesterase family signature 1. GfTLmHEHI
ChainResidueDetails
AGLY50-ILE58

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues5
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"7794910","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1DPM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1EYW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1EZ2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1HZY","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2O4M","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2O4Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2OB3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2OQL","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsBinding site: {"description":"via carbamate group","evidences":[{"source":"PubMed","id":"7794910","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1DPM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1EYW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1EZ2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1HZY","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2O4M","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2O4Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2OB3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2OQL","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues1
DetailsModified residue: {"description":"N6-carboxylysine","evidences":[{"source":"PROSITE-ProRule","id":"PRU00679","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"7794910","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"1DPM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1EYW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1EZ2","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"1HZY","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2O4M","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2O4Q","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2OB3","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2OQL","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

Catalytic Information from CSA
site_idMCSA1
Number of Residues8
DetailsM-CSA 159
ChainResidueDetails
AHIS55metal ligand
AHIS57metal ligand
ALYS169metal ligand
AHIS201metal ligand
AHIS230metal ligand
AASP233hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor
AARG254hydrogen bond acceptor, hydrogen bond donor, proton acceptor, proton donor, proton relay
AASP301hydrogen bond acceptor, hydrogen bond donor, metal ligand, proton acceptor, proton donor

247536

PDB entries from 2026-01-14

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