6G88
Crystal structure of Enterococcus Faecium D63r Penicillin-Binding protein 5 (PBP5fm)
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0005886 | cellular_component | plasma membrane |
A | 0008658 | molecular_function | penicillin binding |
A | 0016020 | cellular_component | membrane |
A | 0046677 | biological_process | response to antibiotic |
A | 0071555 | biological_process | cell wall organization |
A | 0071972 | molecular_function | peptidoglycan L,D-transpeptidase activity |
B | 0005886 | cellular_component | plasma membrane |
B | 0008658 | molecular_function | penicillin binding |
B | 0016020 | cellular_component | membrane |
B | 0046677 | biological_process | response to antibiotic |
B | 0071555 | biological_process | cell wall organization |
B | 0071972 | molecular_function | peptidoglycan L,D-transpeptidase activity |
C | 0005886 | cellular_component | plasma membrane |
C | 0008658 | molecular_function | penicillin binding |
C | 0016020 | cellular_component | membrane |
C | 0046677 | biological_process | response to antibiotic |
C | 0071555 | biological_process | cell wall organization |
C | 0071972 | molecular_function | peptidoglycan L,D-transpeptidase activity |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 11 |
Details | binding site for residue RB6 A 700 |
Chain | Residue |
A | SER422 |
A | ALA621 |
A | GLU622 |
A | LYS425 |
A | VAL465 |
A | SER480 |
A | ASN482 |
A | GLN540 |
A | THR618 |
A | GLY619 |
A | THR620 |
site_id | AC2 |
Number of Residues | 3 |
Details | binding site for residue SO4 A 701 |
Chain | Residue |
A | GLY493 |
A | GLU494 |
A | LYS495 |
site_id | AC3 |
Number of Residues | 3 |
Details | binding site for residue SO4 B 701 |
Chain | Residue |
B | GLY493 |
B | GLU494 |
B | LYS495 |
site_id | AC4 |
Number of Residues | 3 |
Details | binding site for residue SO4 C 701 |
Chain | Residue |
C | GLY493 |
C | GLU494 |
C | LYS495 |
site_id | AC5 |
Number of Residues | 14 |
Details | binding site for Di-peptide RB6 B 700 and SER B 422 |
Chain | Residue |
B | GLY421 |
B | THR423 |
B | PHE424 |
B | LYS425 |
B | VAL465 |
B | SER480 |
B | ASN482 |
B | TYR538 |
B | GLN540 |
B | THR618 |
B | GLY619 |
B | THR620 |
B | ALA621 |
B | GLU622 |
site_id | AC6 |
Number of Residues | 14 |
Details | binding site for Di-peptide RB6 C 700 and SER C 422 |
Chain | Residue |
C | GLY421 |
C | THR423 |
C | PHE424 |
C | LYS425 |
C | VAL465 |
C | SER480 |
C | ASN482 |
C | TYR538 |
C | GLN540 |
C | THR618 |
C | GLY619 |
C | THR620 |
C | ALA621 |
C | GLU622 |