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6FZ5

Human N-myristoyltransferase (NMT1) with Myristoyl-CoA and inhibitor bound

Functional Information from GO Data
ChainGOidnamespacecontents
A0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
A0006499biological_processN-terminal protein myristoylation
B0004379molecular_functionglycylpeptide N-tetradecanoyltransferase activity
B0006499biological_processN-terminal protein myristoylation
Functional Information from PDB Data
site_idAC1
Number of Residues14
Detailsbinding site for residue BXN A 1000
ChainResidue
AVAL181
ALEU416
ATYR420
ALEU495
AGLN496
AHOH1143
APHE188
APHE190
AASN246
ATHR282
ATYR296
AHIS298
APHE311
ASER405

site_idAC2
Number of Residues28
Detailsbinding site for residue MYA A 1001
ChainResidue
ATYR117
AGLN118
APHE119
ATRP120
AASN179
ATYR180
AVAL181
APHE247
ALEU248
ACYS249
AVAL250
AARG255
ASER256
AARG258
AVAL259
AALA260
APRO261
ATHR268
AVAL271
APHE277
AALA279
ATHR282
ALEU287
ATYR479
AMG1002
AHOH1153
AHOH1187
AHOH1247

site_idAC3
Number of Residues6
Detailsbinding site for residue MG A 1002
ChainResidue
ALEU254
AARG255
ASER256
ALYS257
AVAL259
AMYA1001

site_idAC4
Number of Residues7
Detailsbinding site for residue GOL A 1003
ChainResidue
APRO126
ALYS289
AVAL291
ALEU478
ATRP481
ALYS482
ACYS483

site_idAC5
Number of Residues7
Detailsbinding site for residue GOL A 1004
ChainResidue
AGLU244
APRO364
ATRP374
ATYR423
AVAL494
AGLN496
AHOH1171

site_idAC6
Number of Residues14
Detailsbinding site for residue BXN B 1000
ChainResidue
BVAL181
BASP183
BPHE188
BPHE190
BTHR282
BTYR296
BHIS298
BSER405
BTYR420
BGLY472
BASN473
BLEU495
BGLN496
BHOH1115

site_idAC7
Number of Residues26
Detailsbinding site for residue MYA B 1001
ChainResidue
BMG1002
BHOH1157
BHOH1211
BTYR117
BGLN118
BPHE119
BTRP120
BASN179
BTYR180
BVAL181
BPHE247
BLEU248
BCYS249
BVAL250
BARG255
BSER256
BARG258
BVAL259
BALA260
BPRO261
BTHR268
BVAL271
BPHE277
BTHR282
BLEU287
BTYR479

site_idAC8
Number of Residues7
Detailsbinding site for residue MG B 1002
ChainResidue
BLEU254
BARG255
BSER256
BLYS257
BARG258
BVAL259
BMYA1001

site_idAC9
Number of Residues8
Detailsbinding site for residue GOL B 1003
ChainResidue
BLYS289
BVAL291
BLEU478
BTRP481
BLYS482
BCYS483
BHOH1108
BHOH1192

site_idAD1
Number of Residues6
Detailsbinding site for residue GOL B 1004
ChainResidue
BGLU244
BTRP374
BTYR423
BVAL494
BGLN496
BHOH1264

Functional Information from PROSITE/UniProt
site_idPS00975
Number of Residues9
DetailsNMT_1 Myristoyl-CoA:protein N-myristoyltransferase signature 1. EINFLCvHK
ChainResidueDetails
AGLU244-LYS252

site_idPS00976
Number of Residues7
DetailsNMT_2 Myristoyl-CoA:protein N-myristoyltransferase signature 2. KFGiGDG
ChainResidueDetails
ALYS466-GLY472

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues8
DetailsBINDING: BINDING => ECO:0000269|PubMed:25255805, ECO:0000269|PubMed:32111831, ECO:0000269|Ref.19
ChainResidueDetails
AGLN118
AARG258
AVAL259
AALA260
BGLN118
BARG258
BVAL259
BALA260

site_idSWS_FT_FI2
Number of Residues10
DetailsBINDING: BINDING => ECO:0000269|PubMed:25255805, ECO:0000269|PubMed:32103017, ECO:0000269|PubMed:32111831, ECO:0000269|Ref.19
ChainResidueDetails
APHE119
ATRP120
ALEU248
AVAL250
ASER256
BPHE119
BTRP120
BLEU248
BVAL250
BSER256

site_idSWS_FT_FI3
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:32103017
ChainResidueDetails
APHE247
BPHE247

site_idSWS_FT_FI4
Number of Residues2
DetailsBINDING: BINDING => ECO:0000269|PubMed:25255805, ECO:0000269|Ref.19
ChainResidueDetails
ACYS249
BCYS249

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PDB entries from 2024-06-12

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