6FWS
Structure of DinG in complex with ssDNA and ADPBeF
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0003676 | molecular_function | nucleic acid binding |
A | 0003677 | molecular_function | DNA binding |
A | 0003678 | molecular_function | DNA helicase activity |
A | 0004386 | molecular_function | helicase activity |
A | 0005515 | molecular_function | protein binding |
A | 0005524 | molecular_function | ATP binding |
A | 0006139 | biological_process | nucleobase-containing compound metabolic process |
A | 0006281 | biological_process | DNA repair |
A | 0009432 | biological_process | SOS response |
A | 0016787 | molecular_function | hydrolase activity |
A | 0016818 | molecular_function | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides |
A | 0016853 | molecular_function | isomerase activity |
A | 0016887 | molecular_function | ATP hydrolysis activity |
A | 0032508 | biological_process | DNA duplex unwinding |
A | 0033677 | molecular_function | DNA/RNA helicase activity |
A | 0043139 | molecular_function | 5'-3' DNA helicase activity |
A | 0044806 | biological_process | G-quadruplex DNA unwinding |
A | 0046872 | molecular_function | metal ion binding |
A | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
B | 0003676 | molecular_function | nucleic acid binding |
B | 0003677 | molecular_function | DNA binding |
B | 0003678 | molecular_function | DNA helicase activity |
B | 0004386 | molecular_function | helicase activity |
B | 0005515 | molecular_function | protein binding |
B | 0005524 | molecular_function | ATP binding |
B | 0006139 | biological_process | nucleobase-containing compound metabolic process |
B | 0006281 | biological_process | DNA repair |
B | 0009432 | biological_process | SOS response |
B | 0016787 | molecular_function | hydrolase activity |
B | 0016818 | molecular_function | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides |
B | 0016853 | molecular_function | isomerase activity |
B | 0016887 | molecular_function | ATP hydrolysis activity |
B | 0032508 | biological_process | DNA duplex unwinding |
B | 0033677 | molecular_function | DNA/RNA helicase activity |
B | 0043139 | molecular_function | 5'-3' DNA helicase activity |
B | 0044806 | biological_process | G-quadruplex DNA unwinding |
B | 0046872 | molecular_function | metal ion binding |
B | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 6 |
Details | binding site for residue SF4 A 801 |
Chain | Residue |
A | ARG115 |
A | CYS120 |
A | PRO121 |
A | ARG122 |
A | CYS205 |
A | HOH919 |
site_id | AC2 |
Number of Residues | 18 |
Details | binding site for residue ADP A 802 |
Chain | Residue |
A | GLN31 |
A | GLY57 |
A | GLY59 |
A | LYS60 |
A | THR61 |
A | LYS95 |
A | ASP599 |
A | LYS601 |
A | ARG659 |
A | BEF803 |
A | MG804 |
A | HOH935 |
A | HOH940 |
A | HOH975 |
A | HOH977 |
A | PHE25 |
A | ILE26 |
A | ARG28 |
site_id | AC3 |
Number of Residues | 11 |
Details | binding site for residue BEF A 803 |
Chain | Residue |
A | THR56 |
A | LYS60 |
A | GLU249 |
A | GLY597 |
A | ARG656 |
A | ARG659 |
A | ADP802 |
A | MG804 |
A | HOH935 |
A | HOH956 |
A | HOH996 |
site_id | AC4 |
Number of Residues | 7 |
Details | binding site for residue MG A 804 |
Chain | Residue |
A | GLU249 |
A | ADP802 |
A | BEF803 |
A | HOH935 |
A | HOH977 |
A | HOH979 |
A | HOH996 |
site_id | AC5 |
Number of Residues | 6 |
Details | binding site for residue SF4 B 801 |
Chain | Residue |
B | ARG115 |
B | CYS120 |
B | PRO121 |
B | CYS205 |
B | PHE208 |
B | HOH1039 |
site_id | AC6 |
Number of Residues | 17 |
Details | binding site for residue ADP B 802 |
Chain | Residue |
B | PHE25 |
B | ILE26 |
B | ARG28 |
B | GLN31 |
B | GLY57 |
B | GLY59 |
B | LYS60 |
B | THR61 |
B | LEU62 |
B | LYS95 |
B | ASP599 |
B | LYS601 |
B | ARG659 |
B | BEF803 |
B | MG804 |
B | HOH946 |
B | HOH951 |
site_id | AC7 |
Number of Residues | 13 |
Details | binding site for residue BEF B 803 |
Chain | Residue |
B | THR56 |
B | LYS60 |
B | GLU249 |
B | ALA460 |
B | GLU596 |
B | ARG656 |
B | ARG659 |
B | ADP802 |
B | MG804 |
B | HOH903 |
B | HOH946 |
B | HOH954 |
B | HOH963 |
site_id | AC8 |
Number of Residues | 6 |
Details | binding site for residue MG B 804 |
Chain | Residue |
B | ADP802 |
B | BEF803 |
B | HOH946 |
B | HOH951 |
B | HOH963 |
B | HOH1004 |
Functional Information from SwissProt/UniProt
site_id | SWS_FT_FI1 |
Number of Residues | 14 |
Details | BINDING: BINDING => ECO:0000305|PubMed:30520735, ECO:0007744|PDB:6FWS |
Chain | Residue | Details |
A | ILE26 | |
B | LYS60 | |
B | THR61 | |
B | ASP599 | |
B | ARG656 | |
B | ARG659 | |
A | GLN31 | |
A | LYS60 | |
A | THR61 | |
A | ASP599 | |
A | ARG656 | |
A | ARG659 | |
B | ILE26 | |
B | GLN31 |
site_id | SWS_FT_FI2 |
Number of Residues | 8 |
Details | BINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_02205, ECO:0000269|PubMed:30520735, ECO:0000305|PubMed:19074432, ECO:0007744|PDB:6FWS |
Chain | Residue | Details |
A | CYS120 | |
A | CYS194 | |
A | CYS199 | |
A | CYS205 | |
B | CYS120 | |
B | CYS194 | |
B | CYS199 | |
B | CYS205 |