Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6FRN

Structure of F420H2 oxidase (FprA) co-crystallized with 10mM Tb-Xo4 and calcium chloride

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0000166	molecular_function	nucleotide binding
A	0009055	molecular_function	electron transfer activity
A	0010181	molecular_function	FMN binding
A	0016491	molecular_function	oxidoreductase activity
A	0046872	molecular_function	metal ion binding
B	0000166	molecular_function	nucleotide binding
B	0009055	molecular_function	electron transfer activity
B	0010181	molecular_function	FMN binding
B	0016491	molecular_function	oxidoreductase activity
B	0046872	molecular_function	metal ion binding
C	0000166	molecular_function	nucleotide binding
C	0009055	molecular_function	electron transfer activity
C	0010181	molecular_function	FMN binding
C	0016491	molecular_function	oxidoreductase activity
C	0046872	molecular_function	metal ion binding
D	0000166	molecular_function	nucleotide binding
D	0009055	molecular_function	electron transfer activity
D	0010181	molecular_function	FMN binding
D	0016491	molecular_function	oxidoreductase activity
D	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	24
Details	binding site for residue FMN A 501

Chain	Residue
A	THR266
A	TYR320
A	ASP321
A	SER353
A	MET354
A	GLY355
A	GLY356
A	ASN357
A	GLY358
A	TYR383
A	HOH617
A	MET267
A	HOH619
D	TRP153
D	LEU203
D	PE4510
D	HOH610
A	HIS268
A	GLY269
A	SER270
A	THR271
A	PRO317
A	THR318
A	ILE319

site_id	AC2
Number of Residues	6
Details	binding site for residue CA A 502

Chain	Residue
A	ASP297
A	HOH622
A	HOH654
A	HOH760
B	HOH702
B	HOH710

site_id	AC3
Number of Residues	5
Details	binding site for residue CA A 503

Chain	Residue
A	ASP10
A	HOH646
A	HOH711
A	HOH803
C	GLU164

site_id	AC4
Number of Residues	3
Details	binding site for residue CA A 504

Chain	Residue
A	GLU113
A	HOH805
C	HOH810

site_id	AC5
Number of Residues	6
Details	binding site for residue TB A 505

Chain	Residue
A	GLU86
A	ASP88
A	HIS89
A	ASP171
A	HIS234
A	GOL506

site_id	AC6
Number of Residues	9
Details	binding site for residue GOL A 506

Chain	Residue
A	TYR25
A	HIS26
A	GLU86
A	ASP88
A	ASP171
A	HIS176
A	LEU203
A	HIS234
A	TB505

site_id	AC7
Number of Residues	24
Details	binding site for residue FMN B 501

Chain	Residue
B	THR266
B	MET267
B	HIS268
B	GLY269
B	SER270
B	THR271
B	PRO317
B	THR318
B	ILE319
B	TYR320
B	ASP321
B	SER353
B	MET354
B	GLY355
B	GLY356
B	ASN357
B	GLY358
B	TYR383
B	HOH627
B	HOH632
B	HOH691
C	LEU203
C	PE4510
C	HOH618

site_id	AC8
Number of Residues	5
Details	binding site for residue CA B 502

Chain	Residue
A	HOH695
A	HOH706
B	ASP297
B	HOH675
B	HOH757

site_id	AC9
Number of Residues	3
Details	binding site for residue CA B 503

Chain	Residue
B	GLU113
B	HOH778
D	HOH787

site_id	AD1
Number of Residues	6
Details	binding site for residue TB B 504

Chain	Residue
B	ASP88
B	HIS89
B	ASP171
B	HIS234
B	GOL507
B	HOH601

site_id	AD2
Number of Residues	2
Details	binding site for residue PE4 B 505

Chain	Residue
B	ASP377
B	LYS392

site_id	AD3
Number of Residues	3
Details	binding site for residue PE4 B 506

Chain	Residue
B	LYS65
B	GLU95
B	LYS99

site_id	AD4
Number of Residues	10
Details	binding site for residue GOL B 507

Chain	Residue
B	ASP88
B	ASP171
B	HIS176
B	LEU203
B	HIS234
B	TB504
B	HOH601
B	TYR25
B	HIS26
B	GLU86

site_id	AD5
Number of Residues	23
Details	binding site for residue FMN C 501

Chain	Residue
B	GLU86
B	HOH616
C	THR266
C	MET267
C	HIS268
C	GLY269
C	SER270
C	THR271
C	PRO317
C	THR318
C	ILE319
C	TYR320
C	ASP321
C	SER353
C	MET354
C	GLY355
C	GLY356
C	ASN357
C	GLY358
C	TYR383
C	HOH623
C	HOH632
C	HOH700

site_id	AD6
Number of Residues	6
Details	binding site for residue CA C 502

Chain	Residue
C	ASP297
C	HOH648
C	HOH732
C	HOH773
D	HOH661
D	HOH708

site_id	AD7
Number of Residues	4
Details	binding site for residue CA C 503

Chain	Residue
C	ASP44
C	7MT508
C	GOL512
C	HOH602

site_id	AD8
Number of Residues	1
Details	binding site for residue CA C 504

Chain	Residue
C	ASP321

site_id	AD9
Number of Residues	4
Details	binding site for residue CA C 505

Chain	Residue
C	GLU378
C	HOH783
C	HOH786
D	HOH821

site_id	AE1
Number of Residues	1
Details	binding site for residue CA C 506

Chain	Residue
C	GLU217

site_id	AE2
Number of Residues	6
Details	binding site for residue TB C 507

Chain	Residue
C	GLU86
C	ASP88
C	HIS89
C	ASP171
C	HIS234
C	GOL513

site_id	AE3
Number of Residues	7
Details	binding site for residue 7MT C 508

Chain	Residue
C	ARG73
C	GLU74
C	CA503
C	7MT509
C	PE4511
C	GOL512
C	HOH602

site_id	AE4
Number of Residues	4
Details	binding site for residue 7MT C 509

Chain	Residue
C	GLY72
C	GLU74
C	7MT508
C	HOH601

site_id	AE5
Number of Residues	9
Details	binding site for residue PE4 C 510

Chain	Residue
B	TYR320
B	FMN501
C	HIS84
C	LEU150
C	TRP153
C	LEU203
C	ILE204
C	HOH605
C	HOH651

site_id	AE6
Number of Residues	5
Details	binding site for residue PE4 C 511

Chain	Residue
C	GLU74
C	LYS76
C	ASP78
C	GLU102
C	7MT508

site_id	AE7
Number of Residues	8
Details	binding site for residue GOL C 512

Chain	Residue
C	ASP44
C	VAL46
C	ARG73
C	GLU74
C	ASP78
C	CA503
C	7MT508
C	HOH678

site_id	AE8
Number of Residues	10
Details	binding site for residue GOL C 513

Chain	Residue
C	TYR25
C	HIS26
C	GLU86
C	ASP88
C	ASP171
C	HIS176
C	LEU203
C	HIS234
C	TB507
C	HOH605

site_id	AE9
Number of Residues	22
Details	binding site for residue FMN D 501

Chain	Residue
A	LEU203
D	THR266
D	MET267
D	HIS268
D	GLY269
D	SER270
D	THR271
D	PRO317
D	THR318
D	ILE319
D	TYR320
D	ASP321
D	SER353
D	MET354
D	GLY355
D	GLY356
D	ASN357
D	GLY358
D	TYR383
D	HOH627
D	HOH641
D	HOH700

site_id	AF1
Number of Residues	6
Details	binding site for residue CA D 502

Chain	Residue
D	ASP44
D	7MT508
D	GOL512
D	HOH677
D	HOH695
D	HOH733

site_id	AF2
Number of Residues	6
Details	binding site for residue CA D 503

Chain	Residue
C	HOH611
C	HOH674
C	HOH682
C	HOH704
D	ASP297
D	HOH619

site_id	AF3
Number of Residues	3
Details	binding site for residue CA D 504

Chain	Residue
D	ASP321
D	HOH725
D	HOH778

site_id	AF4
Number of Residues	4
Details	binding site for residue CA D 505

Chain	Residue
D	LYS362
D	GLU378
D	HOH746
D	HOH781

site_id	AF5
Number of Residues	1
Details	binding site for residue CA D 506

Chain	Residue
D	GLU217

site_id	AF6
Number of Residues	6
Details	binding site for residue TB D 507

Chain	Residue
D	GLU86
D	ASP88
D	HIS89
D	ASP171
D	HIS234
D	GOL513

site_id	AF7
Number of Residues	10
Details	binding site for residue 7MT D 508

Chain	Residue
D	ARG73
D	GLU74
D	LYS76
D	CA502
D	7MT509
D	PE4511
D	GOL512
D	HOH611
D	HOH677
D	HOH733

site_id	AF8
Number of Residues	5
Details	binding site for residue 7MT D 509

Chain	Residue
D	GLY72
D	GLU74
D	7MT508
D	HOH601
D	HOH603

site_id	AF9
Number of Residues	9
Details	binding site for residue PE4 D 510

Chain	Residue
A	TYR320
A	TYR383
A	FMN501
D	HIS84
D	TRP153
D	ASP155
D	LEU203
D	ILE204
D	HOH698

site_id	AG1
Number of Residues	5
Details	binding site for residue PE4 D 511

Chain	Residue
D	LYS76
D	GLU102
D	7MT508
D	HOH611
D	HOH667

site_id	AG2
Number of Residues	10
Details	binding site for residue GOL D 512

Chain	Residue
D	ASP44
D	VAL46
D	ARG73
D	GLU74
D	ASP78
D	CA502
D	7MT508
D	HOH658
D	HOH677
D	HOH695

site_id	AG3
Number of Residues	9
Details	binding site for residue GOL D 513

Chain	Residue
D	TYR25
D	HIS26
D	GLU86
D	ASP88
D	ASP171
D	HIS176
D	LEU203
D	HIS234
D	TB507

site_id	AG4
Number of Residues	3
Details	binding site for residue NA D 514

Chain	Residue
D	PHE119
D	PRO120
D	SER121

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)