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6FIU

Human cytosolic 5'-nucleotidase II soaked with 10mM 2-(6-([1,1'-Biphenyl]-3-carboxamido)-9H-purin-9-yl)acetic acid

Functional Information from GO Data
ChainGOidnamespacecontents
A0000166molecular_functionnucleotide binding
A0000255biological_processallantoin metabolic process
A0003824molecular_functioncatalytic activity
A0005515molecular_functionprotein binding
A0005524molecular_functionATP binding
A0005737cellular_componentcytoplasm
A0005829cellular_componentcytosol
A0006204biological_processIMP catabolic process
A0008253molecular_function5'-nucleotidase activity
A0009117biological_processnucleotide metabolic process
A0016740molecular_functiontransferase activity
A0016787molecular_functionhydrolase activity
A0042802molecular_functionidentical protein binding
A0046037biological_processGMP metabolic process
A0046040biological_processIMP metabolic process
A0046054biological_processdGMP metabolic process
A0046055biological_processdGMP catabolic process
A0046085biological_processadenosine metabolic process
A0046872molecular_functionmetal ion binding
A0050146molecular_functionnucleoside phosphotransferase activity
A0050689biological_processnegative regulation of defense response to virus by host
A0061630molecular_functionubiquitin protein ligase activity
A0070936biological_processprotein K48-linked ubiquitination
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue SO4 A 601
ChainResidue
AASN250
AHOH715
AHOH723
AHOH744
AHOH753

site_idAC2
Number of Residues2
Detailsbinding site for residue SO4 A 602
ChainResidue
AASP187
AGLY188

site_idAC3
Number of Residues4
Detailsbinding site for residue SO4 A 603
ChainResidue
AARG29
ATYR475
ALYS25
AARG28

site_idAC4
Number of Residues5
Detailsbinding site for residue SO4 A 604
ChainResidue
AGLY130
APRO131
AARG134
ALYS140
ASO4607

site_idAC5
Number of Residues5
Detailsbinding site for residue SO4 A 605
ChainResidue
AARG144
AGLN453
AARG456
AARG456
ATYR457

site_idAC6
Number of Residues3
Detailsbinding site for residue SO4 A 606
ChainResidue
AASN117
ALYS344
AARG446

site_idAC7
Number of Residues6
Detailsbinding site for residue SO4 A 607
ChainResidue
AARG129
AGLY130
APRO131
ALYS140
ALYS424
ASO4604

site_idAC8
Number of Residues3
Detailsbinding site for residue GOL A 608
ChainResidue
AARG76
ATRP207
ALYS211

site_idAC9
Number of Residues5
Detailsbinding site for residue GOL A 609
ChainResidue
APRO96
AGLU378
ATYR434
ALEU440
AHOH741

site_idAD1
Number of Residues5
Detailsbinding site for residue GOL A 610
ChainResidue
AASP257
ATHR261
ATRP279
AGLN280
AHOH704

site_idAD2
Number of Residues8
Detailsbinding site for residue GOL A 611
ChainResidue
AARG39
AASN117
ALYS344
ALYS361
AARG367
AARG446
AASP459
AHOH835

site_idAD3
Number of Residues7
Detailsbinding site for residue GOL A 612
ChainResidue
AASP252
ATYR253
AVAL288
AASP289
AGLY310
ALEU312
AHOH703

site_idAD4
Number of Residues9
Detailsbinding site for residue GOL A 613
ChainResidue
APHE283
AASP284
AILE286
ALEU321
AGLN322
AHIS323
AGLY324
AILE325
AHOH713

site_idAD5
Number of Residues6
Detailsbinding site for residue MG A 614
ChainResidue
AASP52
AASP54
AASP351
AHOH723
AHOH732
AHOH753

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsActive site: {"description":"Nucleophile","evidences":[{"source":"PubMed","id":"21396942","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues1
DetailsActive site: {"description":"Proton donor","evidences":[{"source":"PubMed","id":"21396942","evidenceCode":"ECO:0000305"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17405878","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21396942","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2J2C","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JC9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JCM","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XCV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XCW","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XJB","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XJC","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XJD","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XJE","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues2
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21396942","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2XJB","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI5
Number of Residues4
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21396942","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2XJC","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI6
Number of Residues7
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"21396942","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2XCV","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2XCW","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI7
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17405878","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"21396942","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2J2C","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JC9","evidenceCode":"ECO:0007744"},{"source":"PDB","id":"2JCM","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI8
Number of Residues1
DetailsBinding site: {"evidences":[{"source":"PubMed","id":"17405878","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"2JC9","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI9
Number of Residues1
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

247536

PDB entries from 2026-01-14

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