6FAH
Molecular basis of the flavin-based electron-bifurcating caffeyl-CoA reductase reaction
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0005737 | cellular_component | cytoplasm |
| A | 0009055 | molecular_function | electron transfer activity |
| A | 0016491 | molecular_function | oxidoreductase activity |
| A | 0016628 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor |
| A | 0033539 | biological_process | fatty acid beta-oxidation using acyl-CoA dehydrogenase |
| A | 0046872 | molecular_function | metal ion binding |
| A | 0050660 | molecular_function | flavin adenine dinucleotide binding |
| A | 0051536 | molecular_function | iron-sulfur cluster binding |
| A | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| A | 0071949 | molecular_function | FAD binding |
| B | 0005737 | cellular_component | cytoplasm |
| B | 0009055 | molecular_function | electron transfer activity |
| B | 0016491 | molecular_function | oxidoreductase activity |
| B | 0016628 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor |
| B | 0071949 | molecular_function | FAD binding |
| C | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
| C | 0005737 | cellular_component | cytoplasm |
| C | 0016491 | molecular_function | oxidoreductase activity |
| C | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
| C | 0016628 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor |
| C | 0050660 | molecular_function | flavin adenine dinucleotide binding |
| C | 0071949 | molecular_function | FAD binding |
| D | 0003995 | molecular_function | acyl-CoA dehydrogenase activity |
| D | 0005737 | cellular_component | cytoplasm |
| D | 0016491 | molecular_function | oxidoreductase activity |
| D | 0016627 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors |
| D | 0016628 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor |
| D | 0050660 | molecular_function | flavin adenine dinucleotide binding |
| D | 0071949 | molecular_function | FAD binding |
| E | 0005737 | cellular_component | cytoplasm |
| E | 0009055 | molecular_function | electron transfer activity |
| E | 0016491 | molecular_function | oxidoreductase activity |
| E | 0016628 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor |
| E | 0033539 | biological_process | fatty acid beta-oxidation using acyl-CoA dehydrogenase |
| E | 0046872 | molecular_function | metal ion binding |
| E | 0050660 | molecular_function | flavin adenine dinucleotide binding |
| E | 0051536 | molecular_function | iron-sulfur cluster binding |
| E | 0051539 | molecular_function | 4 iron, 4 sulfur cluster binding |
| E | 0071949 | molecular_function | FAD binding |
| F | 0005737 | cellular_component | cytoplasm |
| F | 0009055 | molecular_function | electron transfer activity |
| F | 0016491 | molecular_function | oxidoreductase activity |
| F | 0016628 | molecular_function | oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor |
| F | 0071949 | molecular_function | FAD binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 26 |
| Details | binding site for residue FAD A 401 |
| Chain | Residue |
| A | GLY283 |
| A | THR327 |
| A | GLY328 |
| A | GLY340 |
| A | ILE341 |
| A | SER342 |
| A | ALA344 |
| A | GLN346 |
| A | HIS347 |
| A | ASN361 |
| A | LYS362 |
| A | MET284 |
| A | GLY378 |
| A | ASP379 |
| A | LEU380 |
| C | TYR346 |
| D | PRO127 |
| D | ARG152 |
| D | GLU198 |
| A | GLY285 |
| A | SER309 |
| A | ARG310 |
| A | ALA311 |
| A | VAL324 |
| A | GLY325 |
| A | GLN326 |
| site_id | AC2 |
| Number of Residues | 6 |
| Details | binding site for residue SF4 A 402 |
| Chain | Residue |
| A | CYS10 |
| A | GLY12 |
| A | CYS13 |
| A | CYS16 |
| A | CYS48 |
| A | ALA52 |
| site_id | AC3 |
| Number of Residues | 8 |
| Details | binding site for residue SF4 A 403 |
| Chain | Residue |
| A | CYS20 |
| A | PRO21 |
| A | ALA37 |
| A | CYS38 |
| A | THR39 |
| A | ASN40 |
| A | CYS41 |
| A | CYS44 |
| site_id | AC4 |
| Number of Residues | 25 |
| Details | binding site for residue FAD B 301 |
| Chain | Residue |
| A | LEU183 |
| A | THR184 |
| A | ARG203 |
| A | ILE214 |
| B | CYS6 |
| B | ALA7 |
| B | LYS8 |
| B | ASP38 |
| B | THR61 |
| B | MET62 |
| B | ALA93 |
| B | ASP94 |
| B | THR95 |
| B | THR98 |
| B | LEU102 |
| B | GLY118 |
| B | GLN120 |
| B | ALA121 |
| B | GLY124 |
| B | ASP125 |
| B | THR126 |
| B | ALA127 |
| B | GLN128 |
| B | VAL129 |
| B | THR223 |
| site_id | AC5 |
| Number of Residues | 21 |
| Details | binding site for residue FAD C 401 |
| Chain | Residue |
| C | PHE122 |
| C | LEU124 |
| C | THR125 |
| C | GLY130 |
| C | SER131 |
| C | PHE155 |
| C | THR157 |
| C | GLN278 |
| C | GLU362 |
| C | GLY363 |
| C | THR364 |
| C | GLN366 |
| D | ARG267 |
| D | GLN269 |
| D | PHE270 |
| D | ILE274 |
| D | PHE277 |
| D | GLN335 |
| D | ILE336 |
| D | GLY338 |
| D | GLY339 |
| site_id | AC6 |
| Number of Residues | 2 |
| Details | binding site for residue SO4 C 402 |
| Chain | Residue |
| C | LYS344 |
| D | LYS344 |
| site_id | AC7 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 C 403 |
| Chain | Residue |
| C | GLU324 |
| C | ARG356 |
| D | GLN335 |
| site_id | AC8 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 C 404 |
| Chain | Residue |
| C | ASP286 |
| C | LYS290 |
| C | TYR321 |
| site_id | AC9 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 C 405 |
| Chain | Residue |
| A | GLN326 |
| C | GLU259 |
| C | TYR346 |
| C | LYS347 |
| site_id | AD1 |
| Number of Residues | 4 |
| Details | binding site for residue SO4 C 406 |
| Chain | Residue |
| C | GLN248 |
| C | TYR361 |
| C | GLU362 |
| C | SER87 |
| site_id | AD2 |
| Number of Residues | 20 |
| Details | binding site for residue FAD D 401 |
| Chain | Residue |
| C | ARG267 |
| C | GLN269 |
| C | PHE270 |
| C | ILE274 |
| C | PHE277 |
| C | ILE280 |
| C | GLN335 |
| C | ILE336 |
| C | GLY339 |
| D | PHE122 |
| D | LEU124 |
| D | THR125 |
| D | GLY130 |
| D | PHE155 |
| D | THR157 |
| D | GLN278 |
| D | TYR361 |
| D | GLU362 |
| D | THR364 |
| D | GLN366 |
| site_id | AD3 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 D 402 |
| Chain | Residue |
| D | VAL84 |
| D | TYR361 |
| D | GLU362 |
| site_id | AD4 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 D 403 |
| Chain | Residue |
| D | GLU19 |
| D | LEU22 |
| D | THR24 |
| site_id | AD5 |
| Number of Residues | 24 |
| Details | binding site for residue FAD E 401 |
| Chain | Residue |
| C | ARG152 |
| C | GLU198 |
| D | TYR346 |
| E | MET284 |
| E | GLY285 |
| E | SER309 |
| E | ARG310 |
| E | ALA311 |
| E | GLN323 |
| E | VAL324 |
| E | GLY325 |
| E | GLN326 |
| E | THR327 |
| E | GLY328 |
| E | GLY340 |
| E | ILE341 |
| E | SER342 |
| E | GLY343 |
| E | GLN346 |
| E | HIS347 |
| E | ASN361 |
| E | LYS362 |
| E | ASP379 |
| E | LEU380 |
| site_id | AD6 |
| Number of Residues | 5 |
| Details | binding site for residue SF4 E 402 |
| Chain | Residue |
| E | CYS10 |
| E | CYS13 |
| E | CYS16 |
| E | CYS48 |
| E | ALA52 |
| site_id | AD7 |
| Number of Residues | 7 |
| Details | binding site for residue SF4 E 403 |
| Chain | Residue |
| E | CYS20 |
| E | PRO21 |
| E | CYS38 |
| E | THR39 |
| E | ASN40 |
| E | CYS41 |
| E | CYS44 |
| site_id | AD8 |
| Number of Residues | 24 |
| Details | binding site for residue FAD F 301 |
| Chain | Residue |
| E | LEU183 |
| E | ARG203 |
| E | ILE214 |
| F | CYS6 |
| F | ALA7 |
| F | LYS8 |
| F | ASP38 |
| F | THR61 |
| F | MET62 |
| F | ALA93 |
| F | ASP94 |
| F | THR95 |
| F | THR98 |
| F | ALA117 |
| F | GLY118 |
| F | GLN120 |
| F | ALA121 |
| F | GLY124 |
| F | ASP125 |
| F | THR126 |
| F | ALA127 |
| F | GLN128 |
| F | VAL129 |
| F | THR223 |
Functional Information from PROSITE/UniProt
| site_id | PS00072 |
| Number of Residues | 13 |
| Details | ACYL_COA_DH_1 Acyl-CoA dehydrogenases signature 1. ALTEpgAGSDagG |
| Chain | Residue | Details |
| C | ALA123-GLY135 |
| site_id | PS00073 |
| Number of Residues | 20 |
| Details | ACYL_COA_DH_2 Acyl-CoA dehydrogenases signature 2. QiHGGyGYikEykveRmyrD |
| Chain | Residue | Details |
| C | GLN335-ASP354 |
| site_id | PS00198 |
| Number of Residues | 12 |
| Details | 4FE4S_FER_1 4Fe-4S ferredoxin-type iron-sulfur binding region signature. CiGCSkCQkSCP |
| Chain | Residue | Details |
| A | CYS10-PRO21 | |
| A | CYS38-PRO49 |
| site_id | PS01065 |
| Number of Residues | 21 |
| Details | ETF_BETA Electron transfer flavoprotein beta-subunit signature. VhRqmEDGy.EvIevqlPcLLT |
| Chain | Residue | Details |
| B | VAL157-THR177 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 56 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P13804","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 2 |
| Details | Active site: {"description":"Proton acceptor","evidences":[{"source":"UniProtKB","id":"P15651","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 28 |
| Details | Binding site: {"description":"in other chain","evidences":[{"source":"UniProtKB","id":"P15651","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 20 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P15651","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |






