6EOE
Crystal structure of AMPylated GRP78 with nucleotide
Functional Information from GO Data
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 13 |
| Details | binding site for residue FLC A 601 |
| Chain | Residue |
| A | ARG197 |
| A | HOH701 |
| A | HOH716 |
| A | HOH796 |
| A | HOH828 |
| A | ARG336 |
| A | SER337 |
| A | LYS340 |
| A | GLN401 |
| A | VAL404 |
| A | LEU405 |
| A | VAL415 |
| A | LEU416 |
| site_id | AC2 |
| Number of Residues | 12 |
| Details | binding site for residue SO4 A 602 |
| Chain | Residue |
| A | GLY36 |
| A | THR37 |
| A | LYS96 |
| A | GLU201 |
| A | GLY226 |
| A | GLY227 |
| A | GLY228 |
| A | ALA229 |
| A | ADP603 |
| A | HOH725 |
| A | HOH772 |
| A | HOH792 |
| site_id | AC3 |
| Number of Residues | 22 |
| Details | binding site for residue ADP A 603 |
| Chain | Residue |
| A | GLY36 |
| A | THR37 |
| A | THR38 |
| A | TYR39 |
| A | GLY226 |
| A | GLY227 |
| A | GLY255 |
| A | GLU293 |
| A | LYS296 |
| A | ARG297 |
| A | SER300 |
| A | GLY363 |
| A | GLY364 |
| A | SER365 |
| A | ARG367 |
| A | ILE368 |
| A | ASP391 |
| A | SO4602 |
| A | HOH722 |
| A | HOH734 |
| A | HOH738 |
| A | HOH899 |
Functional Information from PROSITE/UniProt
| site_id | PS00297 |
| Number of Residues | 8 |
| Details | HSP70_1 Heat shock hsp70 proteins family signature 1. IDLGTTyS |
| Chain | Residue | Details |
| A | ILE33-SER40 |
| site_id | PS00329 |
| Number of Residues | 14 |
| Details | HSP70_2 Heat shock hsp70 proteins family signature 2. VFDLGGGAfdvSLL |
| Chain | Residue | Details |
| A | VAL222-LEU235 |
| site_id | PS01036 |
| Number of Residues | 15 |
| Details | HSP70_3 Heat shock hsp70 proteins family signature 3. IvLvGGsTRIPkIqQ |
| Chain | Residue | Details |
| A | ILE359-GLN373 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 155 |
| Details | Region: {"description":"Nucleotide-binding (NBD)","evidences":[{"source":"UniProtKB","id":"P11021","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI2 |
| Number of Residues | 10 |
| Details | Region: {"description":"Interdomain linker","evidences":[{"source":"PubMed","id":"26473973","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI3 |
| Number of Residues | 80 |
| Details | Region: {"description":"Substrate-binding (SBD)","evidences":[{"source":"UniProtKB","id":"P11021","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI4 |
| Number of Residues | 15 |
| Details | Binding site: {"evidences":[{"source":"PubMed","id":"29064368","evidenceCode":"ECO:0000269"},{"source":"PDB","id":"6EOE","evidenceCode":"ECO:0000312"},{"source":"PDB","id":"6EOF","evidenceCode":"ECO:0000312"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI5 |
| Number of Residues | 1 |
| Details | Binding site: {"evidences":[{"source":"UniProtKB","id":"P11021","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI6 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphoserine","evidences":[{"source":"UniProtKB","id":"P06761","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI7 |
| Number of Residues | 3 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P20029","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI8 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"3'-nitrotyrosine","evidences":[{"source":"UniProtKB","id":"P20029","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI9 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine","evidences":[{"source":"UniProtKB","id":"P0DMV8","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI10 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-acetyllysine; alternate","evidences":[{"source":"UniProtKB","id":"P20029","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI11 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"N6-succinyllysine","evidences":[{"source":"UniProtKB","id":"P20029","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI12 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Omega-N-methylarginine","evidences":[{"source":"UniProtKB","id":"P0DMV8","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI13 |
| Number of Residues | 1 |
| Details | Modified residue: {"description":"Phosphothreonine; alternate","evidences":[{"source":"UniProtKB","id":"P11021","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI14 |
| Number of Residues | 1 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"UniProtKB","id":"P11021","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
| site_id | SWS_FT_FI15 |
| Number of Residues | 2 |
| Details | Cross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO1); alternate","evidences":[{"source":"UniProtKB","id":"P11021","evidenceCode":"ECO:0000250"}]} |
| Chain | Residue | Details |
