Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6E8N

Crystal structure of glycosylated human EPDR1

Functional Information from GO Data
ChainGOidnamespacecontents
A0005509molecular_functioncalcium ion binding
A0005515molecular_functionprotein binding
A0005543molecular_functionphospholipid binding
A0005576cellular_componentextracellular region
A0005764cellular_componentlysosome
A0007160biological_processcell-matrix adhesion
A0008289molecular_functionlipid binding
A0042802molecular_functionidentical protein binding
A0043202cellular_componentlysosomal lumen
A1905573molecular_functionganglioside GM1 binding
A1990764biological_processmyofibroblast contraction
B0005509molecular_functioncalcium ion binding
B0005515molecular_functionprotein binding
B0005543molecular_functionphospholipid binding
B0005576cellular_componentextracellular region
B0005764cellular_componentlysosome
B0007160biological_processcell-matrix adhesion
B0008289molecular_functionlipid binding
B0042802molecular_functionidentical protein binding
B0043202cellular_componentlysosomal lumen
B1905573molecular_functionganglioside GM1 binding
B1990764biological_processmyofibroblast contraction
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue 2PE A 501
ChainResidue
AGLN52
AGLN120
AGLU161
APHE179

site_idAC2
Number of Residues5
Detailsbinding site for residue 2PE B 501
ChainResidue
BGLN52
BTYR98
BGLN120
BASP123
BGLU161

Functional Information from PROSITE/UniProt
site_idPS00898
Number of Residues12
DetailsEPENDYMIN_1 Ependymins signature 1. DQATKQCSkMTL
ChainResidueDetails
AASP107-LEU118

site_idPS00899
Number of Residues14
DetailsEPENDYMIN_2 Ependymins signature 2. FtPPSTCQMAqLEK
ChainResidueDetails
APHE204-LYS217

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218, ECO:0000269|PubMed:30729188
ChainResidueDetails
AASN130
BASN130

site_idSWS_FT_FI2
Number of Residues2
DetailsCARBOHYD: N-linked (GlcNAc...) asparagine => ECO:0000255
ChainResidueDetails
AASN182
BASN182

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon