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6E6M

Crystal structure of human cellular retinol-binding protein 1 in complex with cannabidiorcin (CBDO)

Functional Information from GO Data
ChainGOidnamespacecontents
A0002138biological_processretinoic acid biosynthetic process
A0005501molecular_functionretinoid binding
A0005504molecular_functionfatty acid binding
A0005515molecular_functionprotein binding
A0005634cellular_componentnucleus
A0005654cellular_componentnucleoplasm
A0005737cellular_componentcytoplasm
A0005811cellular_componentlipid droplet
A0005829cellular_componentcytosol
A0006776biological_processvitamin A metabolic process
A0008289molecular_functionlipid binding
A0015908biological_processfatty acid transport
A0016918molecular_functionretinal binding
A0019841molecular_functionretinol binding
A0055088biological_processlipid homeostasis
A1904768molecular_functionall-trans-retinol binding
B0002138biological_processretinoic acid biosynthetic process
B0005501molecular_functionretinoid binding
B0005504molecular_functionfatty acid binding
B0005515molecular_functionprotein binding
B0005634cellular_componentnucleus
B0005654cellular_componentnucleoplasm
B0005737cellular_componentcytoplasm
B0005811cellular_componentlipid droplet
B0005829cellular_componentcytosol
B0006776biological_processvitamin A metabolic process
B0008289molecular_functionlipid binding
B0015908biological_processfatty acid transport
B0016918molecular_functionretinal binding
B0019841molecular_functionretinol binding
B0055088biological_processlipid homeostasis
B1904768molecular_functionall-trans-retinol binding
C0002138biological_processretinoic acid biosynthetic process
C0005501molecular_functionretinoid binding
C0005504molecular_functionfatty acid binding
C0005515molecular_functionprotein binding
C0005634cellular_componentnucleus
C0005654cellular_componentnucleoplasm
C0005737cellular_componentcytoplasm
C0005811cellular_componentlipid droplet
C0005829cellular_componentcytosol
C0006776biological_processvitamin A metabolic process
C0008289molecular_functionlipid binding
C0015908biological_processfatty acid transport
C0016918molecular_functionretinal binding
C0019841molecular_functionretinol binding
C0055088biological_processlipid homeostasis
C1904768molecular_functionall-trans-retinol binding
Functional Information from PDB Data
site_idAC1
Number of Residues10
Detailsbinding site for residue 8CB A 201
ChainResidue
AMET10
AGLN128
AASN13
APHE16
AALA33
APRO38
ASER55
AARG58
ATYR60
AGLY76

site_idAC2
Number of Residues11
Detailsbinding site for residue 8CB B 201
ChainResidue
BMET10
BASN13
BPHE16
BALA33
BLEU36
BPRO38
BSER55
BARG58
BGLY76
BGLN128
BHOH321

site_idAC3
Number of Residues10
Detailsbinding site for residue 8CB C 201
ChainResidue
CMET10
CASN13
CPHE16
CALA33
CLEU36
CPRO38
CSER55
CARG58
CGLY76
CGLN128

Functional Information from PROSITE/UniProt
site_idPS00214
Number of Residues18
DetailsFABP Cytosolic fatty-acid binding proteins signature. GYWkMlvNeNFEeYLRAL
ChainResidueDetails
AGLY6-LEU23

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:26900151, ECO:0007744|PDB:5H8T, ECO:0007744|PDB:5HBS, ECO:0007744|PDB:5LJB, ECO:0007744|PDB:5LJC
ChainResidueDetails
ALYS40
BLYS40
CLYS40

site_idSWS_FT_FI2
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:28057518, ECO:0007744|PDB:5LJC, ECO:0007744|PDB:5LJE
ChainResidueDetails
AMET62
BMET62
CMET62

site_idSWS_FT_FI3
Number of Residues3
DetailsBINDING: BINDING => ECO:0000269|PubMed:26900151, ECO:0000269|PubMed:28057518, ECO:0007744|PDB:5H8T, ECO:0007744|PDB:5HBS, ECO:0007744|PDB:5LJB, ECO:0007744|PDB:5LJC, ECO:0007744|PDB:5LJD, ECO:0007744|PDB:5LJE
ChainResidueDetails
AGLN108
BGLN108
CGLN108

218500

PDB entries from 2024-04-17

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