6E6I

Crystal structure of 4-methyl HOPDA bound to LigY from Sphingobium sp. strain SYK-6

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0016787	molecular_function	hydrolase activity
A	0016831	molecular_function	carboxy-lyase activity
B	0016787	molecular_function	hydrolase activity
B	0016831	molecular_function	carboxy-lyase activity
C	0016787	molecular_function	hydrolase activity
C	0016831	molecular_function	carboxy-lyase activity
D	0016787	molecular_function	hydrolase activity
D	0016831	molecular_function	carboxy-lyase activity
E	0016787	molecular_function	hydrolase activity
E	0016831	molecular_function	carboxy-lyase activity
F	0016787	molecular_function	hydrolase activity
F	0016831	molecular_function	carboxy-lyase activity
G	0016787	molecular_function	hydrolase activity
G	0016831	molecular_function	carboxy-lyase activity
H	0016787	molecular_function	hydrolase activity
H	0016831	molecular_function	carboxy-lyase activity
I	0016787	molecular_function	hydrolase activity
I	0016831	molecular_function	carboxy-lyase activity

Functional Information from PDB Data

site_id	AC1
Number of Residues	4
Details	binding site for residue ZN A 400

Chain	Residue
A	HIS6
A	HIS8
A	HIS179
A	HVS401

---

site_id	AC2
Number of Residues	16
Details	binding site for residue HVS A 401

Chain	Residue
A	PHE74
A	HIS179
A	PHE194
A	HIS223
A	ARG234
A	GLU282
A	GLY285
A	VAL286
A	ZN400
A	HOH531
F	HIS29
A	HIS6
A	HIS8
A	TRP51
A	ARG72
A	PRO73

---

site_id	AC3
Number of Residues	4
Details	binding site for residue ZN B 400

Chain	Residue
B	HIS6
B	HIS8
B	HIS179
B	HVS401

---

site_id	AC4
Number of Residues	15
Details	binding site for residue HVS B 401

Chain	Residue
B	HIS6
B	HIS8
B	TRP51
B	ARG72
B	PRO73
B	PHE74
B	HIS179
B	PHE194
B	HIS223
B	GLU282
B	GLY285
B	VAL286
B	ZN400
C	ARG234
E	HIS29

---

site_id	AC5
Number of Residues	4
Details	binding site for residue ZN C 400

Chain	Residue
C	HIS6
C	HIS8
C	HIS179
C	HVS401

---

site_id	AC6
Number of Residues	16
Details	binding site for residue HVS C 401

Chain	Residue
B	ARG234
C	HIS6
C	HIS8
C	TRP51
C	ARG72
C	PRO73
C	PHE74
C	HIS179
C	PHE194
C	HIS223
C	GLU282
C	GLY285
C	VAL286
C	ZN400
C	HOH510
D	HIS29

---

site_id	AC7
Number of Residues	4
Details	binding site for residue ZN D 400

Chain	Residue
D	HIS6
D	HIS8
D	HIS179
D	HVS401

---

site_id	AC8
Number of Residues	15
Details	binding site for residue HVS D 401

Chain	Residue
C	HIS29
D	HIS6
D	HIS8
D	TRP51
D	PRO73
D	PHE74
D	HIS179
D	PHE194
D	HIS223
D	GLU282
D	GLY285
D	VAL286
D	ZN400
D	HOH506
I	ARG234

---

site_id	AC9
Number of Residues	4
Details	binding site for residue ZN E 400

Chain	Residue
E	HIS6
E	HIS8
E	HIS179
E	HVS401

---

site_id	AD1
Number of Residues	13
Details	binding site for residue HVS E 401

Chain	Residue
E	HIS6
E	HIS8
E	TRP51
E	PRO73
E	PHE74
E	HIS179
E	PHE194
E	HIS223
E	GLU282
E	GLY285
E	VAL286
E	ZN400
H	ARG234

---

site_id	AD2
Number of Residues	4
Details	binding site for residue ZN F 400

Chain	Residue
F	HIS6
F	HIS8
F	HIS179
F	HVS401

---

site_id	AD3
Number of Residues	15
Details	binding site for residue HVS F 401

Chain	Residue
F	HIS6
F	HIS8
F	TRP51
F	ARG72
F	PRO73
F	PHE74
F	HIS179
F	TYR190
F	PHE194
F	HIS223
F	GLU282
F	GLY285
F	VAL286
F	ZN400
G	ARG234

---

site_id	AD4
Number of Residues	4
Details	binding site for residue ZN G 400

Chain	Residue
G	HIS6
G	HIS8
G	HIS179
G	HVS401

---

site_id	AD5
Number of Residues	13
Details	binding site for residue HVS G 401

Chain	Residue
F	ARG234
G	HIS6
G	HIS8
G	PRO73
G	PHE74
G	HIS179
G	PHE194
G	HIS223
G	GLU282
G	GLY285
G	VAL286
G	ZN400
G	HOH502

---

site_id	AD6
Number of Residues	4
Details	binding site for residue ZN H 400

Chain	Residue
H	HIS6
H	HIS8
H	HIS179
H	HVS401

---

site_id	AD7
Number of Residues	14
Details	binding site for residue HVS H 401

Chain	Residue
E	ARG234
H	HIS6
H	HIS8
H	TRP51
H	ARG72
H	PRO73
H	HIS179
H	PHE194
H	HIS223
H	GLU282
H	GLY285
H	VAL286
H	ZN400
I	HIS29

---

site_id	AD8
Number of Residues	4
Details	binding site for residue ZN I 400

Chain	Residue
I	HIS6
I	HIS8
I	HIS179
I	HVS401

---

site_id	AD9
Number of Residues	17
Details	binding site for residue HVS I 401

Chain	Residue
D	ARG234
H	HIS29
I	HIS6
I	HIS8
I	TRP51
I	ARG72
I	PRO73
I	PHE74
I	HIS179
I	TYR190
I	PHE194
I	HIS223
I	GLU282
I	GLY285
I	VAL286
I	ZN400
I	HOH519

---