6E30

Mechanism of cellular recognition by PCV2

This is a large structure.
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Functional Information from GO Data

ChainGOidnamespacecontents
A10042025cellular_componenthost cell nucleus
A10019069biological_processviral capsid assembly
A20042025cellular_componenthost cell nucleus
A20019069biological_processviral capsid assembly
A30042025cellular_componenthost cell nucleus
A30019069biological_processviral capsid assembly
A40042025cellular_componenthost cell nucleus
A40019069biological_processviral capsid assembly
A50042025cellular_componenthost cell nucleus
A50019069biological_processviral capsid assembly
A60042025cellular_componenthost cell nucleus
A60019069biological_processviral capsid assembly
A70042025cellular_componenthost cell nucleus
A70019069biological_processviral capsid assembly
A80042025cellular_componenthost cell nucleus
A80019069biological_processviral capsid assembly
A90042025cellular_componenthost cell nucleus
A90019069biological_processviral capsid assembly
AA0042025cellular_componenthost cell nucleus
AA0019069biological_processviral capsid assembly
AB0042025cellular_componenthost cell nucleus
AB0019069biological_processviral capsid assembly
AC0042025cellular_componenthost cell nucleus
AC0019069biological_processviral capsid assembly
AD0042025cellular_componenthost cell nucleus
AD0019069biological_processviral capsid assembly
AE0042025cellular_componenthost cell nucleus
AE0019069biological_processviral capsid assembly
AF0042025cellular_componenthost cell nucleus
AF0019069biological_processviral capsid assembly
AG0042025cellular_componenthost cell nucleus
AG0019069biological_processviral capsid assembly
AH0042025cellular_componenthost cell nucleus
AH0019069biological_processviral capsid assembly
AI0042025cellular_componenthost cell nucleus
AI0019069biological_processviral capsid assembly
AJ0042025cellular_componenthost cell nucleus
AJ0019069biological_processviral capsid assembly
AK0042025cellular_componenthost cell nucleus
AK0019069biological_processviral capsid assembly
AL0042025cellular_componenthost cell nucleus
AL0019069biological_processviral capsid assembly
AM0042025cellular_componenthost cell nucleus
AM0019069biological_processviral capsid assembly
AN0042025cellular_componenthost cell nucleus
AN0019069biological_processviral capsid assembly
AO0042025cellular_componenthost cell nucleus
AO0019069biological_processviral capsid assembly
AP0042025cellular_componenthost cell nucleus
AP0019069biological_processviral capsid assembly
AQ0042025cellular_componenthost cell nucleus
AQ0019069biological_processviral capsid assembly
AR0042025cellular_componenthost cell nucleus
AR0019069biological_processviral capsid assembly
AS0042025cellular_componenthost cell nucleus
AS0019069biological_processviral capsid assembly
AT0042025cellular_componenthost cell nucleus
AT0019069biological_processviral capsid assembly
AU0042025cellular_componenthost cell nucleus
AU0019069biological_processviral capsid assembly
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Functional Information from PDB Data

site_idNumber of ResiduesDetails
AC15binding site for Poly-Saccharide residues SGN A1 301 through SGN A1 305
ChainResidue
A1TYR138
A1THR170
ANARG186
ANTHR189
ANLYS227

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Functional Information from PDB atom coordinates for the "HETATM" binding sites

site_idNumber of ResiduesDetails
SGN_6e30_A1_3037N,O6-DISULFO-GLUCOSAMINE binding site
ChainResidueligand
A1ASN128-PHE129SGN: N,O6-DISULFO-GLUCOSAMINE
ANPRO88SGN: N,O6-DISULFO-GLUCOSAMINE
ANARG186SGN: N,O6-DISULFO-GLUCOSAMINE
ANTHR189-ALA190SGN: N,O6-DISULFO-GLUCOSAMINE
ANLYS227SGN: N,O6-DISULFO-GLUCOSAMINE

IDS_6e30_A1_30452-O-sulfo-alpha-L-idopyranuronic acid binding site
ChainResidueligand
A1ASN128IDS: 2-O-sulfo-alpha-L-idopyranuronic acid
ANGLN188-GLY191IDS: 2-O-sulfo-alpha-L-idopyranuronic acid

IDS_6e30_A1_30272-O-sulfo-alpha-L-idopyranuronic acid binding site
ChainResidueligand
A1PHE129-THR131IDS: 2-O-sulfo-alpha-L-idopyranuronic acid
ANGLY85-SER86IDS: 2-O-sulfo-alpha-L-idopyranuronic acid
ANPRO88IDS: 2-O-sulfo-alpha-L-idopyranuronic acid
ANLYS227IDS: 2-O-sulfo-alpha-L-idopyranuronic acid

SGN_6e30_A1_3016N,O6-DISULFO-GLUCOSAMINE binding site
ChainResidueligand
A1VAL130-THR131SGN: N,O6-DISULFO-GLUCOSAMINE
A1LEU136SGN: N,O6-DISULFO-GLUCOSAMINE
A1TYR138SGN: N,O6-DISULFO-GLUCOSAMINE
ANSER86SGN: N,O6-DISULFO-GLUCOSAMINE
ANLYS227SGN: N,O6-DISULFO-GLUCOSAMINE

SGN_6e30_A1_3054N,O6-DISULFO-GLUCOSAMINE binding site
ChainResidueligand
A1SER169-THR170SGN: N,O6-DISULFO-GLUCOSAMINE
ANGLN188SGN: N,O6-DISULFO-GLUCOSAMINE
ANGLY191SGN: N,O6-DISULFO-GLUCOSAMINE

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Functional Information from PROSITE/UniProt

site_idNumber of ResiduesDetails
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Functional Information from SwissProt/UniProt

site_idNumber of ResiduesDetails
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Catalytic Information from CSA

site_idNumber of ResiduesDetails