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6DYT

Citrobacter freundii tyrosine phenol-lyase F448A mutant complexed with L-alanine

Functional Information from GO Data
ChainGOidnamespacecontents
A0006520biological_processamino acid metabolic process
A0006570biological_processtyrosine metabolic process
A0009072biological_processaromatic amino acid metabolic process
A0016829molecular_functionlyase activity
A0016830molecular_functioncarbon-carbon lyase activity
A0050371molecular_functiontyrosine phenol-lyase activity
B0006520biological_processamino acid metabolic process
B0006570biological_processtyrosine metabolic process
B0009072biological_processaromatic amino acid metabolic process
B0016829molecular_functionlyase activity
B0016830molecular_functioncarbon-carbon lyase activity
B0050371molecular_functiontyrosine phenol-lyase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue K A 501
ChainResidue
AGLY52
AASN262
AHOH673
BGLU69
BHOH1631
BHOH1663

site_idAC2
Number of Residues6
Detailsbinding site for residue K A 502
ChainResidue
BGLY52
BASN262
BHOH1702
AGLU69
AHOH635
AHOH678

site_idAC3
Number of Residues16
Detailsbinding site for residue F0G A 503
ChainResidue
ATHR49
AGLN98
AGLY99
AARG100
AGLU103
APHE123
ATHR125
AASN185
AASP214
ATHR216
AARG217
ASER254
ALYS257
AARG404
AHOH612
BTYR71

site_idAC4
Number of Residues15
Detailsbinding site for residue PP3 B 1501
ChainResidue
ATYR71
BTHR49
BGLN98
BGLY99
BARG100
BGLU103
BPHE123
BASN185
BASP214
BTHR216
BARG217
BSER254
BLYS257
BARG404
BHOH1637

site_idAC5
Number of Residues10
Detailsbinding site for residue P33 B 1502
ChainResidue
ATYR3
ATYR324
ATYR414
AASP418
AASP422
BTYR3
BASP418
BHOH1605
BHOH1654
BHOH1756

Functional Information from PROSITE/UniProt
site_idPS00853
Number of Residues19
DetailsBETA_ELIM_LYASE Beta-eliminating lyases pyridoxal-phosphate attachment site. YaDgctMSGKKDcLVnIGG
ChainResidueDetails
ATYR247-GLY265

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues2
DetailsMOD_RES: N6-(pyridoxal phosphate)lysine
ChainResidueDetails
ALYS257
BLYS257

Catalytic Information from CSA
site_idMCSA1
Number of Residues7
DetailsM-CSA 933
ChainResidueDetails
ATYR71proton acceptor, proton donor
APHE123steric role
ATHR124electrostatic stabiliser
AASP214electrostatic stabiliser
ALYS257covalently attached, electron pair acceptor, electron pair donor, nucleofuge, nucleophile, proton acceptor, proton donor
AARG381electrostatic stabiliser
AALA448electrostatic stabiliser, ground state destabiliser

site_idMCSA2
Number of Residues7
DetailsM-CSA 933
ChainResidueDetails
BTYR71proton acceptor, proton donor
BPHE123steric role
BTHR124electrostatic stabiliser
BASP214electrostatic stabiliser
BLYS257covalently attached, electron pair acceptor, electron pair donor, nucleofuge, nucleophile, proton acceptor, proton donor
BARG381electrostatic stabiliser
BALA448electrostatic stabiliser, ground state destabiliser

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PDB entries from 2024-07-03

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