6DRT
Crystal structure of the processivity clamp GP45 complexed with recognition peptide of ligase from bacteriophage T4
Functional Information from GO Data
Chain | GOid | namespace | contents |
A | 0006260 | biological_process | DNA replication |
A | 0019083 | biological_process | viral transcription |
A | 0030337 | molecular_function | DNA polymerase processivity factor activity |
A | 0039686 | biological_process | bidirectional double-stranded viral DNA replication |
A | 0039693 | biological_process | viral DNA genome replication |
B | 0006260 | biological_process | DNA replication |
B | 0019083 | biological_process | viral transcription |
B | 0030337 | molecular_function | DNA polymerase processivity factor activity |
B | 0039686 | biological_process | bidirectional double-stranded viral DNA replication |
B | 0039693 | biological_process | viral DNA genome replication |
C | 0006260 | biological_process | DNA replication |
C | 0019083 | biological_process | viral transcription |
C | 0030337 | molecular_function | DNA polymerase processivity factor activity |
C | 0039686 | biological_process | bidirectional double-stranded viral DNA replication |
C | 0039693 | biological_process | viral DNA genome replication |
Functional Information from PDB Data
site_id | AC1 |
Number of Residues | 4 |
Details | binding site for residue EDO A 1301 |
Chain | Residue |
A | LEU1127 |
A | MET1184 |
A | MET1187 |
A | LYS1188 |
site_id | AC2 |
Number of Residues | 5 |
Details | binding site for residue EDO B 1301 |
Chain | Residue |
B | GLY1132 |
B | LEU1133 |
B | GLN1134 |
B | LYS1164 |
C | PRO1093 |
site_id | AC3 |
Number of Residues | 4 |
Details | binding site for residue EDO B 1302 |
Chain | Residue |
B | SER1130 |
B | MET1184 |
B | MET1187 |
B | LYS1188 |
site_id | AC4 |
Number of Residues | 5 |
Details | binding site for residue EDO C 1301 |
Chain | Residue |
B | TYR1055 |
C | PRO1108 |
C | PHE1109 |
C | LEU1197 |
C | LYS1208 |
site_id | AC5 |
Number of Residues | 5 |
Details | binding site for residue EDO C 1302 |
Chain | Residue |
C | PHE1109 |
C | PRO1110 |
C | VAL1111 |
C | HOH1412 |
F | LEU234 |
site_id | AC6 |
Number of Residues | 6 |
Details | binding site for residue EDO C 1303 |
Chain | Residue |
C | ASN1035 |
C | THR1037 |
C | ASN1183 |
C | ASN1186 |
C | EDO1304 |
C | HOH1439 |
site_id | AC7 |
Number of Residues | 7 |
Details | binding site for residue EDO C 1304 |
Chain | Residue |
C | ILE1017 |
C | ALA1033 |
C | ASN1035 |
C | THR1038 |
C | LYS1188 |
C | EDO1303 |
C | HOH1455 |