6DRT
Crystal structure of the processivity clamp GP45 complexed with recognition peptide of ligase from bacteriophage T4
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0006260 | biological_process | DNA replication |
| A | 0019083 | biological_process | viral transcription |
| A | 0030337 | molecular_function | DNA polymerase processivity factor activity |
| A | 0039686 | biological_process | bidirectional double-stranded viral DNA replication |
| A | 0039693 | biological_process | viral DNA genome replication |
| B | 0006260 | biological_process | DNA replication |
| B | 0019083 | biological_process | viral transcription |
| B | 0030337 | molecular_function | DNA polymerase processivity factor activity |
| B | 0039686 | biological_process | bidirectional double-stranded viral DNA replication |
| B | 0039693 | biological_process | viral DNA genome replication |
| C | 0006260 | biological_process | DNA replication |
| C | 0019083 | biological_process | viral transcription |
| C | 0030337 | molecular_function | DNA polymerase processivity factor activity |
| C | 0039686 | biological_process | bidirectional double-stranded viral DNA replication |
| C | 0039693 | biological_process | viral DNA genome replication |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue EDO A 1301 |
| Chain | Residue |
| A | LEU1127 |
| A | MET1184 |
| A | MET1187 |
| A | LYS1188 |
| site_id | AC2 |
| Number of Residues | 5 |
| Details | binding site for residue EDO B 1301 |
| Chain | Residue |
| B | GLY1132 |
| B | LEU1133 |
| B | GLN1134 |
| B | LYS1164 |
| C | PRO1093 |
| site_id | AC3 |
| Number of Residues | 4 |
| Details | binding site for residue EDO B 1302 |
| Chain | Residue |
| B | SER1130 |
| B | MET1184 |
| B | MET1187 |
| B | LYS1188 |
| site_id | AC4 |
| Number of Residues | 5 |
| Details | binding site for residue EDO C 1301 |
| Chain | Residue |
| B | TYR1055 |
| C | PRO1108 |
| C | PHE1109 |
| C | LEU1197 |
| C | LYS1208 |
| site_id | AC5 |
| Number of Residues | 5 |
| Details | binding site for residue EDO C 1302 |
| Chain | Residue |
| C | PHE1109 |
| C | PRO1110 |
| C | VAL1111 |
| C | HOH1412 |
| F | LEU234 |
| site_id | AC6 |
| Number of Residues | 6 |
| Details | binding site for residue EDO C 1303 |
| Chain | Residue |
| C | ASN1035 |
| C | THR1037 |
| C | ASN1183 |
| C | ASN1186 |
| C | EDO1304 |
| C | HOH1439 |
| site_id | AC7 |
| Number of Residues | 7 |
| Details | binding site for residue EDO C 1304 |
| Chain | Residue |
| C | ILE1017 |
| C | ALA1033 |
| C | ASN1035 |
| C | THR1038 |
| C | LYS1188 |
| C | EDO1303 |
| C | HOH1455 |
Functional Information from SwissProt/UniProt
| site_id | SWS_FT_FI1 |
| Number of Residues | 24 |
| Details | Region: {"description":"Interaction with the sliding clamp","evidences":[{"source":"PubMed","id":"30169742","evidenceCode":"ECO:0000269"}]} |
| Chain | Residue | Details |
