Summary Structural details Experimental details Functional details Sequence Neighbor History Downloads

6DQY

Crystal Structure analysis of Superoxide Dismutase from Trichoderma reesei

Functional Information from GO Data

Chain	GOid	namespace	contents
A	0004784	molecular_function	superoxide dismutase activity
A	0005739	cellular_component	mitochondrion
A	0006801	biological_process	superoxide metabolic process
A	0016491	molecular_function	oxidoreductase activity
A	0019430	biological_process	removal of superoxide radicals
A	0046872	molecular_function	metal ion binding
B	0004784	molecular_function	superoxide dismutase activity
B	0005739	cellular_component	mitochondrion
B	0006801	biological_process	superoxide metabolic process
B	0016491	molecular_function	oxidoreductase activity
B	0019430	biological_process	removal of superoxide radicals
B	0046872	molecular_function	metal ion binding
C	0004784	molecular_function	superoxide dismutase activity
C	0005739	cellular_component	mitochondrion
C	0006801	biological_process	superoxide metabolic process
C	0016491	molecular_function	oxidoreductase activity
C	0019430	biological_process	removal of superoxide radicals
C	0046872	molecular_function	metal ion binding
D	0004784	molecular_function	superoxide dismutase activity
D	0005739	cellular_component	mitochondrion
D	0006801	biological_process	superoxide metabolic process
D	0016491	molecular_function	oxidoreductase activity
D	0019430	biological_process	removal of superoxide radicals
D	0046872	molecular_function	metal ion binding
E	0004784	molecular_function	superoxide dismutase activity
E	0005739	cellular_component	mitochondrion
E	0006801	biological_process	superoxide metabolic process
E	0016491	molecular_function	oxidoreductase activity
E	0019430	biological_process	removal of superoxide radicals
E	0046872	molecular_function	metal ion binding
F	0004784	molecular_function	superoxide dismutase activity
F	0005739	cellular_component	mitochondrion
F	0006801	biological_process	superoxide metabolic process
F	0016491	molecular_function	oxidoreductase activity
F	0019430	biological_process	removal of superoxide radicals
F	0046872	molecular_function	metal ion binding
G	0004784	molecular_function	superoxide dismutase activity
G	0005739	cellular_component	mitochondrion
G	0006801	biological_process	superoxide metabolic process
G	0016491	molecular_function	oxidoreductase activity
G	0019430	biological_process	removal of superoxide radicals
G	0046872	molecular_function	metal ion binding
H	0004784	molecular_function	superoxide dismutase activity
H	0005739	cellular_component	mitochondrion
H	0006801	biological_process	superoxide metabolic process
H	0016491	molecular_function	oxidoreductase activity
H	0019430	biological_process	removal of superoxide radicals
H	0046872	molecular_function	metal ion binding
I	0004784	molecular_function	superoxide dismutase activity
I	0005739	cellular_component	mitochondrion
I	0006801	biological_process	superoxide metabolic process
I	0016491	molecular_function	oxidoreductase activity
I	0019430	biological_process	removal of superoxide radicals
I	0046872	molecular_function	metal ion binding
J	0004784	molecular_function	superoxide dismutase activity
J	0005739	cellular_component	mitochondrion
J	0006801	biological_process	superoxide metabolic process
J	0016491	molecular_function	oxidoreductase activity
J	0019430	biological_process	removal of superoxide radicals
J	0046872	molecular_function	metal ion binding
K	0004784	molecular_function	superoxide dismutase activity
K	0005739	cellular_component	mitochondrion
K	0006801	biological_process	superoxide metabolic process
K	0016491	molecular_function	oxidoreductase activity
K	0019430	biological_process	removal of superoxide radicals
K	0046872	molecular_function	metal ion binding
L	0004784	molecular_function	superoxide dismutase activity
L	0005739	cellular_component	mitochondrion
L	0006801	biological_process	superoxide metabolic process
L	0016491	molecular_function	oxidoreductase activity
L	0019430	biological_process	removal of superoxide radicals
L	0046872	molecular_function	metal ion binding
M	0004784	molecular_function	superoxide dismutase activity
M	0005739	cellular_component	mitochondrion
M	0006801	biological_process	superoxide metabolic process
M	0016491	molecular_function	oxidoreductase activity
M	0019430	biological_process	removal of superoxide radicals
M	0046872	molecular_function	metal ion binding
N	0004784	molecular_function	superoxide dismutase activity
N	0005739	cellular_component	mitochondrion
N	0006801	biological_process	superoxide metabolic process
N	0016491	molecular_function	oxidoreductase activity
N	0019430	biological_process	removal of superoxide radicals
N	0046872	molecular_function	metal ion binding
O	0004784	molecular_function	superoxide dismutase activity
O	0005739	cellular_component	mitochondrion
O	0006801	biological_process	superoxide metabolic process
O	0016491	molecular_function	oxidoreductase activity
O	0019430	biological_process	removal of superoxide radicals
O	0046872	molecular_function	metal ion binding
P	0004784	molecular_function	superoxide dismutase activity
P	0005739	cellular_component	mitochondrion
P	0006801	biological_process	superoxide metabolic process
P	0016491	molecular_function	oxidoreductase activity
P	0019430	biological_process	removal of superoxide radicals
P	0046872	molecular_function	metal ion binding
Q	0004784	molecular_function	superoxide dismutase activity
Q	0005739	cellular_component	mitochondrion
Q	0006801	biological_process	superoxide metabolic process
Q	0016491	molecular_function	oxidoreductase activity
Q	0019430	biological_process	removal of superoxide radicals
Q	0046872	molecular_function	metal ion binding
R	0004784	molecular_function	superoxide dismutase activity
R	0005739	cellular_component	mitochondrion
R	0006801	biological_process	superoxide metabolic process
R	0016491	molecular_function	oxidoreductase activity
R	0019430	biological_process	removal of superoxide radicals
R	0046872	molecular_function	metal ion binding
S	0004784	molecular_function	superoxide dismutase activity
S	0005739	cellular_component	mitochondrion
S	0006801	biological_process	superoxide metabolic process
S	0016491	molecular_function	oxidoreductase activity
S	0019430	biological_process	removal of superoxide radicals
S	0046872	molecular_function	metal ion binding
T	0004784	molecular_function	superoxide dismutase activity
T	0005739	cellular_component	mitochondrion
T	0006801	biological_process	superoxide metabolic process
T	0016491	molecular_function	oxidoreductase activity
T	0019430	biological_process	removal of superoxide radicals
T	0046872	molecular_function	metal ion binding
U	0004784	molecular_function	superoxide dismutase activity
U	0005739	cellular_component	mitochondrion
U	0006801	biological_process	superoxide metabolic process
U	0016491	molecular_function	oxidoreductase activity
U	0019430	biological_process	removal of superoxide radicals
U	0046872	molecular_function	metal ion binding
V	0004784	molecular_function	superoxide dismutase activity
V	0005739	cellular_component	mitochondrion
V	0006801	biological_process	superoxide metabolic process
V	0016491	molecular_function	oxidoreductase activity
V	0019430	biological_process	removal of superoxide radicals
V	0046872	molecular_function	metal ion binding
W	0004784	molecular_function	superoxide dismutase activity
W	0005739	cellular_component	mitochondrion
W	0006801	biological_process	superoxide metabolic process
W	0016491	molecular_function	oxidoreductase activity
W	0019430	biological_process	removal of superoxide radicals
W	0046872	molecular_function	metal ion binding
X	0004784	molecular_function	superoxide dismutase activity
X	0005739	cellular_component	mitochondrion
X	0006801	biological_process	superoxide metabolic process
X	0016491	molecular_function	oxidoreductase activity
X	0019430	biological_process	removal of superoxide radicals
X	0046872	molecular_function	metal ion binding

Functional Information from PDB Data

site_id	AC1
Number of Residues	5
Details	binding site for residue MN A 301

Chain	Residue
A	HIS30
A	HIS78
A	ASP163
A	HIS167
A	HOH419

site_id	AC2
Number of Residues	5
Details	binding site for residue MN B 301

Chain	Residue
B	HOH451
B	HIS30
B	HIS78
B	ASP163
B	HIS167

site_id	AC3
Number of Residues	5
Details	binding site for residue MN C 301

Chain	Residue
C	HIS30
C	HIS78
C	ASP163
C	HIS167
C	HOH462

site_id	AC4
Number of Residues	5
Details	binding site for residue MN D 301

Chain	Residue
D	HIS30
D	HIS78
D	ASP163
D	HIS167
D	HOH415

site_id	AC5
Number of Residues	5
Details	binding site for residue MN E 301

Chain	Residue
E	HIS30
E	HIS78
E	ASP163
E	HIS167
E	HOH451

site_id	AC6
Number of Residues	5
Details	binding site for residue MN F 301

Chain	Residue
F	HIS30
F	HIS78
F	ASP163
F	HIS167
F	HOH448

site_id	AC7
Number of Residues	5
Details	binding site for residue MN G 301

Chain	Residue
G	HIS30
G	HIS78
G	ASP163
G	HIS167
G	HOH455

site_id	AC8
Number of Residues	5
Details	binding site for residue MN H 301

Chain	Residue
H	HIS30
H	HIS78
H	ASP163
H	HIS167
H	HOH428

site_id	AC9
Number of Residues	5
Details	binding site for residue MN I 301

Chain	Residue
I	HIS30
I	HIS78
I	ASP163
I	HIS167
I	HOH446

site_id	AD1
Number of Residues	5
Details	binding site for residue MN J 301

Chain	Residue
J	HIS30
J	HIS78
J	ASP163
J	HIS167
J	HOH447

site_id	AD2
Number of Residues	5
Details	binding site for residue MN K 301

Chain	Residue
K	HIS30
K	HIS78
K	ASP163
K	HIS167
K	HOH427

site_id	AD3
Number of Residues	5
Details	binding site for residue MN L 301

Chain	Residue
L	HIS30
L	HIS78
L	ASP163
L	HIS167
L	HOH430

site_id	AD4
Number of Residues	5
Details	binding site for residue MN M 301

Chain	Residue
M	HIS30
M	HIS78
M	ASP163
M	HIS167
M	HOH470

site_id	AD5
Number of Residues	5
Details	binding site for residue MN N 301

Chain	Residue
N	HIS30
N	HIS78
N	ASP163
N	HIS167
N	HOH429

site_id	AD6
Number of Residues	5
Details	binding site for residue MN O 301

Chain	Residue
O	HIS30
O	HIS78
O	ASP163
O	HIS167
O	HOH450

site_id	AD7
Number of Residues	5
Details	binding site for residue MN P 301

Chain	Residue
P	HIS30
P	HIS78
P	ASP163
P	HIS167
P	HOH421

site_id	AD8
Number of Residues	5
Details	binding site for residue MN Q 301

Chain	Residue
Q	HIS30
Q	HIS78
Q	ASP163
Q	HIS167
Q	HOH409

site_id	AD9
Number of Residues	5
Details	binding site for residue MN R 301

Chain	Residue
R	HIS30
R	HIS78
R	ASP163
R	HIS167
R	HOH405

site_id	AE1
Number of Residues	5
Details	binding site for residue MN S 301

Chain	Residue
S	HIS30
S	HIS78
S	ASP163
S	HIS167
S	HOH424

site_id	AE2
Number of Residues	5
Details	binding site for residue MN T 301

Chain	Residue
T	HOH427
T	HIS30
T	HIS78
T	ASP163
T	HIS167

site_id	AE3
Number of Residues	5
Details	binding site for residue MN U 301

Chain	Residue
U	HIS30
U	HIS78
U	ASP163
U	HIS167
U	HOH403

site_id	AE4
Number of Residues	5
Details	binding site for residue MN V 301

Chain	Residue
V	HIS30
V	HIS78
V	ASP163
V	HIS167
V	HOH424

site_id	AE5
Number of Residues	5
Details	binding site for residue MN W 301

Chain	Residue
W	HIS30
W	HIS78
W	ASP163
W	HIS167
W	HOH425

site_id	AE6
Number of Residues	5
Details	binding site for residue MN X 301

Chain	Residue
X	HIS30
X	HIS78
X	ASP163
X	HIS167
X	HOH404

Functional Information from PROSITE/UniProt

site_id	PS00088
Number of Residues	8
Details	SOD_MN Manganese and iron superoxide dismutases signature. DmWEHAYY

Chain	Residue	Details
A	ASP163-TYR170

		Sequence (fasta)
		PDBx/mmCIF
		PDBML format (no-atom)
		PDB format (full)
		Validation report (PDF)
		EDMap 2fo-fc (MTZ)