6DQB

LINKED KDM5A JMJ DOMAIN FORMING COVALENT BOND TO INHIBITOR N71 i.e. 2-((3-(4-(dimethylamino)but-2-enamido)phenyl)(2-(piperidin-1-yl)ethoxy)methyl)thieno[3,2-b]pyridine-7-carboxylic acid

Functional Information from PDB Data

site_id	AC1
Number of Residues	20
Details	binding site for residue H77 A 601

Chain	Residue
A	ARG73
A	HIS483
A	LYS501
A	TRP503
A	GLN535
A	HIS571
A	HZV602
A	HZM603
A	MN604
A	HOH747
A	HOH775
A	GLN75
A	HOH799
A	TYR409
A	ALA411
A	ASP412
A	TRP470
A	TYR472
A	PHE480
A	CYS481

---

site_id	AC2
Number of Residues	24
Details	binding site for residue HZV A 602

Chain	Residue
A	ARG73
A	GLN75
A	ARG76
A	GLU79
A	TYR409
A	ALA411
A	ASP412
A	TRP470
A	TYR472
A	SER479
A	PHE480
A	CYS481
A	HIS483
A	LYS501
A	TRP503
A	LEU536
A	HIS571
A	H77601
A	HZM603
A	MN604
A	HOH747
A	HOH775
A	HOH791
A	HOH799

---

site_id	AC3
Number of Residues	23
Details	binding site for residue HZM A 603

Chain	Residue
A	ARG73
A	GLN75
A	ARG76
A	GLU79
A	TYR409
A	ALA411
A	ASP412
A	TYR472
A	SER479
A	PHE480
A	CYS481
A	HIS483
A	LYS501
A	TRP503
A	LEU536
A	HIS571
A	H77601
A	HZV602
A	MN604
A	HOH747
A	HOH775
A	HOH791
A	HOH799

---

site_id	AC4
Number of Residues	8
Details	binding site for residue MN A 604

Chain	Residue
A	HIS483
A	GLU485
A	HIS571
A	H77601
A	HZV602
A	HZM603
A	HOH720
A	HOH747

---

site_id	AC5
Number of Residues	9
Details	binding site for residue GOL A 605

Chain	Residue
A	MET380
A	PRO381
A	GLU485
A	ASP486
A	HIS487
A	LEU532
A	HOH702
A	HOH725
A	HOH756

---

site_id	AC6
Number of Residues	5
Details	binding site for residue GOL A 606

Chain	Residue
A	ALA357
A	MET384
A	HOH705
A	HOH708
A	HOH815

---

site_id	AC7
Number of Residues	5
Details	binding site for residue DMS A 607

Chain	Residue
A	MET518
A	ARG519
A	ASP531
A	HIS534
A	GLN535

---

site_id	AC8
Number of Residues	4
Details	binding site for residue DMS A 608

Chain	Residue
A	ALA357
A	MET384
A	SER508
A	HOH755

---

Functional Information from SwissProt/UniProt

site_id	SWS_FT_FI1
Number of Residues	41
Details	Domain: {"description":"JmjN","evidences":[{"source":"PROSITE-ProRule","id":"PRU00537","evidenceCode":"ECO:0000255"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI2
Number of Residues	4
Details	Motif: {"description":"GSGFP motif","evidences":[{"source":"UniProtKB","id":"Q3UXZ9","evidenceCode":"ECO:0000250"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI3
Number of Residues	4
Details	Binding site: {"evidences":[{"source":"PubMed","id":"26645689","evidenceCode":"ECO:0000269"},{"source":"PubMed","id":"27427228","evidenceCode":"ECO:0000269"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI4
Number of Residues	2
Details	Binding site: {"evidences":[{"source":"PROSITE-ProRule","id":"PRU00538","evidenceCode":"ECO:0000255"},{"source":"PubMed","id":"26645689","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"27214401","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"27427228","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"27499454","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---

site_id	SWS_FT_FI5
Number of Residues	1
Details	Binding site: {"evidences":[{"source":"PubMed","id":"26645689","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"27214401","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"27427228","evidenceCode":"ECO:0000305"},{"source":"PubMed","id":"27499454","evidenceCode":"ECO:0000305"}]}

Chain

Residue

Details

---