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6DPE

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 20 mM Mn2+ and 200 mM K+ for 40 s at 21 C

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MN A 201
ChainResidue
AASP71
AASP192
AHOH334
AHOH343
bC5

site_idAC2
Number of Residues5
Detailsbinding site for residue MN A 202
ChainResidue
bC5
AASP71
AGLU109
AASP132
BU4

site_idAC3
Number of Residues6
Detailsbinding site for residue MN A 203
ChainResidue
AASP163
AGLU166
AHOH309
AHOH327
AHOH330
AHOH402

site_idAC4
Number of Residues4
Detailsbinding site for residue MN A 204
ChainResidue
ALYS196
AHOH370
CHOH102
CHOH110

site_idAC5
Number of Residues4
Detailsbinding site for residue K A 205
ChainResidue
AGLU188
BU4
BHOH209
bC5

site_idAC6
Number of Residues1
Detailsbinding site for residue IOD A 206
ChainResidue
ATYR83

site_idAC7
Number of Residues2
Detailsbinding site for residue IOD A 208
ChainResidue
AILE64
AHOH442

site_idAC8
Number of Residues6
Detailsbinding site for residue GOL A 210
ChainResidue
AGLY76
AASN77
APRO78
AHOH307
CDG2
CDA3

site_idAC9
Number of Residues7
Detailsbinding site for residue GOL A 211
ChainResidue
AHIS115
ATYR119
AARG123
AGLU167
AASN170
AGOL212
AHOH326

site_idAD1
Number of Residues5
Detailsbinding site for residue GOL A 212
ChainResidue
AHIS115
AARG118
AASN170
AGOL211
AHOH312

site_idAD2
Number of Residues4
Detailsbinding site for residue EDO A 213
ChainResidue
ALYS143
ATHR173
ATYR174
AHOH318

site_idAD3
Number of Residues3
Detailsbinding site for residue EDO A 214
ChainResidue
ATHR148
CDT4
CDG5

site_idAD4
Number of Residues3
Detailsbinding site for residue EDO A 215
ChainResidue
AGLU66
ALEU94
ALYS127

site_idAD5
Number of Residues4
Detailsbinding site for residue EDO A 216
ChainResidue
AGLU62
AILE63
ATRP65
AHOH345

site_idAD6
Number of Residues8
Detailsbinding site for residue PGE A 217
ChainResidue
APRO78
ATHR148
ALEU149
AVAL150
AASN152
AGLU154
CHOH104
CHOH108

site_idAD7
Number of Residues4
Detailsbinding site for residue MN B 101
ChainResidue
ALYS196
BHOH211
CHOH101
bG6

site_idAD8
Number of Residues1
Detailsbinding site for residue IOD B 102
ChainResidue
AHOH380

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP71
AGLU109
AASP132
AASP192

224201

PDB entries from 2024-08-28

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