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6DPD

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 16 mM Mn2+ and 200 mM K+ for 40 s at 21 C

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MN A 201
ChainResidue
AASP71
AASP192
AHOH321
AHOH359
bC5

site_idAC2
Number of Residues5
Detailsbinding site for residue MN A 202
ChainResidue
bC5
AASP71
AGLU109
AASP132
BU4

site_idAC3
Number of Residues5
Detailsbinding site for residue MN A 203
ChainResidue
AASP192
ALYS196
BHOH207
bC5
bG6

site_idAC4
Number of Residues6
Detailsbinding site for residue MN A 204
ChainResidue
AASP163
AGLU166
AHOH343
AHOH346
AHOH361
AHOH415

site_idAC5
Number of Residues4
Detailsbinding site for residue MN A 205
ChainResidue
ALYS196
AHOH392
CHOH105
CHOH106

site_idAC6
Number of Residues4
Detailsbinding site for residue K A 206
ChainResidue
AGLU188
BU4
BHOH211
bC5

site_idAC7
Number of Residues1
Detailsbinding site for residue IOD A 207
ChainResidue
ATYR83

site_idAC8
Number of Residues3
Detailsbinding site for residue IOD A 209
ChainResidue
AILE64
AHOH449
AHOH454

site_idAC9
Number of Residues6
Detailsbinding site for residue GOL A 211
ChainResidue
AGLY76
AASN77
APRO78
AHOH309
CDG2
CDA3

site_idAD1
Number of Residues6
Detailsbinding site for residue GOL A 212
ChainResidue
AHIS115
ATYR119
AARG123
AGLU167
AASN170
AGOL213

site_idAD2
Number of Residues5
Detailsbinding site for residue GOL A 213
ChainResidue
AHIS115
AARG118
AASN170
AGOL212
AHOH302

site_idAD3
Number of Residues4
Detailsbinding site for residue EDO A 214
ChainResidue
ALYS143
ATHR173
ATYR174
AHOH304

site_idAD4
Number of Residues3
Detailsbinding site for residue EDO A 215
ChainResidue
ATHR148
CDT4
CDG5

site_idAD5
Number of Residues3
Detailsbinding site for residue EDO A 216
ChainResidue
AGLU66
ALYS127
AHOH370

site_idAD6
Number of Residues5
Detailsbinding site for residue EDO A 217
ChainResidue
AGLU62
AILE63
ATRP65
AARG151
AHOH385

site_idAD7
Number of Residues7
Detailsbinding site for residue PGE A 218
ChainResidue
ATHR148
ALEU149
AVAL150
AASN152
AGLU154
AHOH310
CHOH107

site_idAD8
Number of Residues5
Detailsbinding site for residue MN B 101
ChainResidue
AHOH314
BHOH210
BHOH212
CHOH103
bG6

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP71
AGLU109
AASP132
AASP192

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PDB entries from 2024-07-17

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