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6DPA

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 4 mM Mn2+ and 200 mM K+ for 40 s at 21 C

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MN A 201
ChainResidue
AASP71
AASP192
AHOH305
AHOH315
AHOH318
bC5

site_idAC2
Number of Residues6
Detailsbinding site for residue MN A 202
ChainResidue
AHOH344
BU4
bC5
AASP71
AGLU109
AASP132

site_idAC3
Number of Residues6
Detailsbinding site for residue K A 203
ChainResidue
AASP192
ATYR193
AGLY194
AHOH305
bC5
bG6

site_idAC4
Number of Residues1
Detailsbinding site for residue IOD A 204
ChainResidue
ATYR83

site_idAC5
Number of Residues3
Detailsbinding site for residue IOD A 207
ChainResidue
AILE64
AHOH433
AHOH437

site_idAC6
Number of Residues7
Detailsbinding site for residue GOL A 208
ChainResidue
AGLY76
AASN77
APRO78
AHOH301
AHOH317
CDG2
CDA3

site_idAC7
Number of Residues8
Detailsbinding site for residue GOL A 209
ChainResidue
AHIS115
AARG118
ATYR119
AARG123
AGLU167
AASN170
AGOL210
AHOH302

site_idAC8
Number of Residues6
Detailsbinding site for residue GOL A 210
ChainResidue
AHIS115
AARG118
AASN170
AGOL209
AHOH303
AHOH387

site_idAC9
Number of Residues3
Detailsbinding site for residue EDO A 211
ChainResidue
ALYS143
ATHR173
ATYR174

site_idAD1
Number of Residues3
Detailsbinding site for residue EDO A 212
ChainResidue
ALYS89
AGLU153
AHOH422

site_idAD2
Number of Residues6
Detailsbinding site for residue EDO A 213
ChainResidue
APRO78
ALEU149
AGLU154
AHOH308
AHOH309
CHOH209

site_idAD3
Number of Residues5
Detailsbinding site for residue K A 214
ChainResidue
AASP132
BU4
BHOH206
bC5
bHOH103

site_idAD4
Number of Residues3
Detailsbinding site for residue K C 101
ChainResidue
CDT4
CDG5
CHOH202

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP192
AASP71
AGLU109
AASP132

221051

PDB entries from 2024-06-12

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