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6DP9

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mn2+ and 200 mM K+ for 40 s at 21 C

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MN A 201
ChainResidue
AASP71
AASP192
AK204
AHOH339
AHOH355
bC5

site_idAC2
Number of Residues5
Detailsbinding site for residue MN A 202
ChainResidue
BU4
bC5
AASP71
AGLU109
AASP132

site_idAC3
Number of Residues6
Detailsbinding site for residue K A 203
ChainResidue
AASP71
AGLU109
AASP132
AHOH349
BU4
bC5

site_idAC4
Number of Residues7
Detailsbinding site for residue K A 204
ChainResidue
AASP71
AVAL72
AASP192
AMN201
AHOH355
bC5
bG6

site_idAC5
Number of Residues1
Detailsbinding site for residue IOD A 205
ChainResidue
ATYR83

site_idAC6
Number of Residues1
Detailsbinding site for residue IOD A 207
ChainResidue
AHIS172

site_idAC7
Number of Residues3
Detailsbinding site for residue IOD A 208
ChainResidue
AILE64
AHOH442
AHOH447

site_idAC8
Number of Residues5
Detailsbinding site for residue GOL A 209
ChainResidue
AASN77
APRO78
CDG2
CDA3
bHOH102

site_idAC9
Number of Residues8
Detailsbinding site for residue GOL A 210
ChainResidue
AHIS115
ATYR119
AARG123
AGLU167
AASN170
AGOL212
AHOH303
AHOH375

site_idAD1
Number of Residues5
Detailsbinding site for residue GOL A 211
ChainResidue
AGLU66
AARG123
ASER125
ALYS127
AHOH320

site_idAD2
Number of Residues4
Detailsbinding site for residue GOL A 212
ChainResidue
AHIS115
AASN170
AGOL210
AHOH302

site_idAD3
Number of Residues4
Detailsbinding site for residue EDO A 213
ChainResidue
ALYS143
ATHR173
ATYR174
AHOH383

site_idAD4
Number of Residues4
Detailsbinding site for residue EDO A 214
ChainResidue
ALYS89
AGLU153
AALA156
AHOH426

site_idAD5
Number of Residues3
Detailsbinding site for residue K C 101
ChainResidue
CDT4
CDG5
CHOH210

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP71
AGLU109
AASP132
AASP192

222036

PDB entries from 2024-07-03

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