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6DP1

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 5 mM Mg2+ and 75 mM K+ for 40 s at 21 C

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 201
ChainResidue
AASP71
AASP192
AHOH318
AHOH322
AHOH365
bC5

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 202
ChainResidue
BU4
bC5
AASP71
AGLU109
AASP132

site_idAC3
Number of Residues6
Detailsbinding site for residue K A 203
ChainResidue
AASP192
AGLY194
AARG195
AHOH317
AHOH318
bG6

site_idAC4
Number of Residues1
Detailsbinding site for residue IOD A 204
ChainResidue
ATYR83

site_idAC5
Number of Residues1
Detailsbinding site for residue IOD A 205
ChainResidue
AHOH339

site_idAC6
Number of Residues3
Detailsbinding site for residue IOD A 206
ChainResidue
AILE64
AHOH459
AHOH464

site_idAC7
Number of Residues2
Detailsbinding site for residue IOD A 207
ChainResidue
AHIS172
AHOH447

site_idAC8
Number of Residues6
Detailsbinding site for residue GOL A 208
ChainResidue
AGLY76
AASN77
APRO78
AHOH312
CDG2
CDA3

site_idAC9
Number of Residues7
Detailsbinding site for residue GOL A 209
ChainResidue
AHIS115
AARG118
ATYR119
AARG123
AGLU167
AASN170
AHOH309

site_idAD1
Number of Residues5
Detailsbinding site for residue GOL A 210
ChainResidue
AGLU66
ASER125
ALYS127
AHOH308
AHOH418

site_idAD2
Number of Residues5
Detailsbinding site for residue EDO A 211
ChainResidue
ALYS143
ATHR173
ATYR174
AHOH366
AHOH421

site_idAD3
Number of Residues6
Detailsbinding site for residue GOL A 212
ChainResidue
ATHR148
AHOH301
AHOH367
CDT4
CDG5
CHOH208

site_idAD4
Number of Residues5
Detailsbinding site for residue EDO A 213
ChainResidue
ALYS89
AALA156
AHOH302
AHOH307
AHOH436

site_idAD5
Number of Residues4
Detailsbinding site for residue K C 101
ChainResidue
BHOH109
CDT4
CDG5
CHOH212

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP71
AGLU109
AASP132
AASP192

224201

PDB entries from 2024-08-28

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