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6DOR

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 300 mM K+ for 120 s at 21 C (dataset 1)

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues5
Detailsbinding site for residue MG A 201
ChainResidue
AASP71
AGLU109
AASP132
BU4
bC5

site_idAC2
Number of Residues8
Detailsbinding site for residue K A 202
ChainResidue
AHOH305
AHOH356
bC5
bG6
AASP192
AGLY194
AARG195
ALYS196

site_idAC3
Number of Residues6
Detailsbinding site for residue K A 203
ChainResidue
AASP132
AGLU188
AHOH317
BU4
BHOH110
bC5

site_idAC4
Number of Residues1
Detailsbinding site for residue IOD A 204
ChainResidue
ATYR83

site_idAC5
Number of Residues3
Detailsbinding site for residue IOD A 206
ChainResidue
AILE64
AHOH445
AHOH450

site_idAC6
Number of Residues1
Detailsbinding site for residue IOD A 207
ChainResidue
AHOH413

site_idAC7
Number of Residues5
Detailsbinding site for residue GOL A 208
ChainResidue
AVAL150
AASN152
AGLU154
AHOH306
CHOH204

site_idAC8
Number of Residues6
Detailsbinding site for residue GOL A 209
ChainResidue
AASN77
APRO78
AHOH395
BHOH109
CDG2
CDA3

site_idAC9
Number of Residues6
Detailsbinding site for residue GOL A 210
ChainResidue
AGLU66
ALEU94
ASER125
ALYS127
AHOH310
AHOH359

site_idAD1
Number of Residues5
Detailsbinding site for residue GOL A 211
ChainResidue
ALYS143
ATHR173
ATYR174
AHOH302
AHOH393

site_idAD2
Number of Residues8
Detailsbinding site for residue GOL A 212
ChainResidue
AHIS115
ATYR119
AGLU122
AARG123
AGLU167
AHOH365
AHOH377
AHOH404

site_idAD3
Number of Residues6
Detailsbinding site for residue PGE A 213
ChainResidue
ALYS180
AGLN182
ATHR183
AASP184
BA3
BU4

site_idAD4
Number of Residues6
Detailsbinding site for residue MG b 201
ChainResidue
AASP71
AASP192
AHOH305
AHOH315
bC5
bHOH301

site_idAD5
Number of Residues4
Detailsbinding site for residue K C 101
ChainResidue
AHOH417
CDT4
CDG5
CHOH214

site_idAD6
Number of Residues5
Detailsbinding site for residue EDO C 102
ChainResidue
ATHR148
CDT4
CDG5
CDT6
CHOH202

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP71
AGLU109
AASP132
AASP192

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PDB entries from 2024-07-17

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