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6DOJ

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 5 mM K+ for 120 s at 21 C

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 201
ChainResidue
AASP71
AASP192
AHOH323
AHOH329
AHOH330
bC5

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 202
ChainResidue
BU4
bC5
AASP71
AGLU109
AASP132

site_idAC3
Number of Residues8
Detailsbinding site for residue K A 203
ChainResidue
AASP192
ATYR193
AGLY194
AARG195
AHOH329
AHOH330
AHOH360
bG6

site_idAC4
Number of Residues4
Detailsbinding site for residue IOD A 204
ChainResidue
AILE64
AEDO211
AHOH463
AHOH467

site_idAC5
Number of Residues5
Detailsbinding site for residue GOL A 205
ChainResidue
AGLY76
AASN77
APRO78
BHOH107
CDG2

site_idAC6
Number of Residues9
Detailsbinding site for residue GOL A 206
ChainResidue
AHIS115
AARG118
ATYR119
AARG123
AGLU167
AASN170
AHOH302
AHOH342
AHOH393

site_idAC7
Number of Residues6
Detailsbinding site for residue GOL A 207
ChainResidue
AGLU66
AARG123
ASER125
ALYS127
AHOH307
AHOH319

site_idAC8
Number of Residues3
Detailsbinding site for residue EDO A 208
ChainResidue
ALYS143
ATHR173
ATYR174

site_idAC9
Number of Residues8
Detailsbinding site for residue GOL A 209
ChainResidue
ATYR83
ALEU111
AHIS115
AARG118
AHOH308
AHOH361
AHOH393
AHOH408

site_idAD1
Number of Residues4
Detailsbinding site for residue EDO A 210
ChainResidue
AVAL150
AASN152
AGLU154
AHOH315

site_idAD2
Number of Residues5
Detailsbinding site for residue EDO A 211
ChainResidue
AARG126
AGLU175
AIOD204
AHOH381
AHOH468

site_idAD3
Number of Residues4
Detailsbinding site for residue EDO C 101
ChainResidue
CDA3
CDT4
CEDO102
CHOH204

site_idAD4
Number of Residues6
Detailsbinding site for residue EDO C 102
ChainResidue
AHOH345
CDT4
CDG5
CEDO101
CHOH205
CHOH210

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP192
AASP71
AGLU109
AASP132

221051

PDB entries from 2024-06-12

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