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6DOG

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 600 s at 21 C

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 201
ChainResidue
AASP71
AASP192
AHOH302
AHOH310
AHOH323
bC5

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 202
ChainResidue
BU4
bC5
AASP71
AGLU109
AASP132

site_idAC3
Number of Residues8
Detailsbinding site for residue K A 203
ChainResidue
AASP192
AGLY194
AARG195
ALYS196
AHOH302
AHOH328
bC5
bG6

site_idAC4
Number of Residues1
Detailsbinding site for residue IOD A 204
ChainResidue
ATYR83

site_idAC5
Number of Residues1
Detailsbinding site for residue IOD A 205
ChainResidue
APGE216

site_idAC6
Number of Residues3
Detailsbinding site for residue IOD A 206
ChainResidue
AILE64
AHOH425
AHOH458

site_idAC7
Number of Residues4
Detailsbinding site for residue EDO A 208
ChainResidue
ALYS143
ATHR173
ATYR174
AHOH309

site_idAC8
Number of Residues5
Detailsbinding site for residue EDO A 209
ChainResidue
ATHR148
AHOH314
CDT4
CDG5
CHOH205

site_idAC9
Number of Residues4
Detailsbinding site for residue EDO A 210
ChainResidue
AILE80
APRO99
AHOH324
AHOH359

site_idAD1
Number of Residues7
Detailsbinding site for residue EDO A 211
ChainResidue
ATRP65
AGLU66
ASER67
AASP87
ALYS127
AGOL215
AHOH383

site_idAD2
Number of Residues5
Detailsbinding site for residue GOL A 212
ChainResidue
AHIS115
AARG118
AASN170
AGOL213
AHOH307

site_idAD3
Number of Residues9
Detailsbinding site for residue GOL A 213
ChainResidue
AHIS115
ATYR119
AGLU122
AARG123
AGLU167
AASN170
AGOL212
AHOH380
AHOH386

site_idAD4
Number of Residues6
Detailsbinding site for residue GOL A 214
ChainResidue
AILE102
AVAL150
AASN152
AGLU154
AHOH390
CHOH208

site_idAD5
Number of Residues6
Detailsbinding site for residue GOL A 215
ChainResidue
AGLU66
ASER125
ALYS127
AEDO211
AHOH336
AHOH383

site_idAD6
Number of Residues10
Detailsbinding site for residue PGE A 216
ChainResidue
AGLN134
ALYS180
AGLN182
ATHR183
AASP184
AIOD205
AHOH413
BA3
BU4
BHOH203

site_idAD7
Number of Residues6
Detailsbinding site for residue K A 217
ChainResidue
AASP132
AGLU188
AHOH316
BU4
BHOH208
bC5

site_idAD8
Number of Residues3
Detailsbinding site for residue K C 101
ChainResidue
CDT4
CDG5
CHOH213

site_idAD9
Number of Residues8
Detailsbinding site for residue GOL C 102
ChainResidue
AGLY76
AASN77
APRO78
AHOH306
BHOH210
CDG2
CDA3
CHOH217

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP71
AGLU109
AASP132
AASP192

227111

PDB entries from 2024-11-06

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