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6DOF

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 2 mM Mg2+ and 200 mM K+ for 540 s at 21 C

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 201
ChainResidue
AASP71
AASP192
AHOH302
AHOH305
AHOH318
bC5

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 202
ChainResidue
BU4
bC5
AASP71
AGLU109
AASP132

site_idAC3
Number of Residues8
Detailsbinding site for residue K A 203
ChainResidue
AASP192
AGLY194
AARG195
ALYS196
AHOH302
AHOH324
bC5
bG6

site_idAC4
Number of Residues1
Detailsbinding site for residue IOD A 204
ChainResidue
ATYR83

site_idAC5
Number of Residues1
Detailsbinding site for residue IOD A 205
ChainResidue
APGE216

site_idAC6
Number of Residues3
Detailsbinding site for residue IOD A 206
ChainResidue
AILE64
AHOH426
AHOH458

site_idAC7
Number of Residues5
Detailsbinding site for residue EDO A 208
ChainResidue
ALYS143
ATHR173
ATYR174
AHOH303
AHOH396

site_idAC8
Number of Residues5
Detailsbinding site for residue EDO A 209
ChainResidue
ATHR148
AHOH312
CDT4
CDG5
CHOH202

site_idAC9
Number of Residues4
Detailsbinding site for residue EDO A 210
ChainResidue
AILE80
APRO99
AHOH355
AHOH359

site_idAD1
Number of Residues6
Detailsbinding site for residue EDO A 211
ChainResidue
ATRP65
AGLU66
ASER67
AASP87
ALYS127
AGOL215

site_idAD2
Number of Residues5
Detailsbinding site for residue GOL A 212
ChainResidue
AHIS115
AARG118
AASN170
AGOL213
AHOH306

site_idAD3
Number of Residues9
Detailsbinding site for residue GOL A 213
ChainResidue
AHIS115
ATYR119
AGLU122
AARG123
AGLU167
AASN170
AGOL212
AHOH389
AHOH401

site_idAD4
Number of Residues7
Detailsbinding site for residue GOL A 214
ChainResidue
APRO78
AILE102
AVAL150
AASN152
AGLU154
AHOH313
CHOH209

site_idAD5
Number of Residues5
Detailsbinding site for residue GOL A 215
ChainResidue
AGLU66
ASER125
ALYS127
AEDO211
AHOH325

site_idAD6
Number of Residues11
Detailsbinding site for residue PGE A 216
ChainResidue
AGLN134
ALYS180
ATRP181
AGLN182
ATHR183
AASP184
AIOD205
AHOH411
BA3
BU4
BHOH204

site_idAD7
Number of Residues5
Detailsbinding site for residue K A 217
ChainResidue
AASP132
AHOH316
BU4
BHOH208
bC5

site_idAD8
Number of Residues3
Detailsbinding site for residue K C 101
ChainResidue
CDT4
CDG5
CHOH212

site_idAD9
Number of Residues7
Detailsbinding site for residue GOL C 102
ChainResidue
AGLY76
AASN77
BHOH207
CDG2
CDA3
CHOH211
CHOH215

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP71
AGLU109
AASP132
AASP192

227111

PDB entries from 2024-11-06

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